Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Mir7071-201ENSMUST00000184847 69 ntBASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbc1A0A0A6YWV4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbc1A0A0A6YWV4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm7638-201ENSMUST00000121348 967 ntBASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbc1A0A0A6YWV4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm11539-201ENSMUST00000119837 557 ntBASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm13436-201ENSMUST00000120418 567 ntBASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms