Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav12d-3A0A075B6A4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm29791-202ENSMUST00000207888 369 ntBASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav12d-3A0A075B6A4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-3A0A075B6A4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms