Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav17A0A075B655 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.54□□□□□ -0.24
Trav17A0A075B655 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav17A0A075B655 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav17A0A075B655 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 AV356131-201ENSMUST00000206201 750 ntBASIC13.53□□□□□ -0.24
Trav17A0A075B655 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav17A0A075B655 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Trav17A0A075B655 Gm11643-201ENSMUST00000119578 864 ntBASIC13.52□□□□□ -0.25
Trav17A0A075B655 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Gm42642-201ENSMUST00000200683 355 ntBASIC13.52□□□□□ -0.25
Trav17A0A075B655 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.52□□□□□ -0.25
Trav17A0A075B655 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Trav17A0A075B655 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav17A0A075B655 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms