Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Gm42545-201ENSMUST00000202755 922 ntBASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Gm18025-201ENSMUST00000221733 862 ntBASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-4A0A075B652 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-4A0A075B652 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Gm18666-201ENSMUST00000190039 958 ntBASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav5-4A0A075B652 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trav5-4A0A075B652 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Trav5-4A0A075B652 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav5-4A0A075B652 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms