Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-4-dv10A0A075B651 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-4-dv10A0A075B651 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-4-dv10A0A075B651 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-4-dv10A0A075B651 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-4-dv10A0A075B651 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm13148-201ENSMUST00000118892 745 ntBASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm4968-201ENSMUST00000071458 858 ntBASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-4-dv10A0A075B651 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Mir5133-201ENSMUST00000174955 77 ntBASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-4-dv10A0A075B651 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm2559-201ENSMUST00000201323 363 ntBASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms