Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-1A0A075B644 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav13-1A0A075B644 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Gm10231-201ENSMUST00000181584 441 ntBASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Gm10175-202ENSMUST00000208752 441 ntBASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-1A0A075B644 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms