Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8n-2A0A075B633 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Gm18195-201ENSMUST00000207604 706 ntBASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav8n-2A0A075B633 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav8n-2A0A075B633 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8n-2A0A075B633 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms