Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.12□□□□□ -1.11
TRAIPQ9BWF2 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRAIPQ9BWF2 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.12□□□□□ -1.11
TRAIPQ9BWF2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRAIPQ9BWF2 AC007485.2-201ENST00000623493 1667 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL161891.1-201ENST00000621575 4636 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC009166.2-201ENST00000624410 2833 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 OR5H2-201ENST00000355273 945 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 snoZ40.1-201ENST00000364540 72 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 RNU5A-2P-201ENST00000384337 116 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 RNU6-83P-201ENST00000384568 112 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 SKINT1L-201ENST00000401057 817 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL355862.1-201ENST00000412705 353 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC027644.1-201ENST00000419595 298 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 GPN3P1-201ENST00000423883 535 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 ANXA2P2-201ENST00000435128 1020 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 COX7BP2-201ENST00000437976 242 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 FGF7P5-201ENST00000441829 291 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL935212.3-201ENST00000450729 284 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 RPL12P40-201ENST00000467028 488 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 PRDX3P4-201ENST00000470828 747 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 RPL9P15-201ENST00000491096 532 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 OR5H4P-201ENST00000510851 923 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC017007.1-201ENST00000511960 415 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC010306.1-201ENST00000523223 1117 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 NBEAP1-201ENST00000554452 979 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 NPM1P47-201ENST00000560843 856 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 COX6CP16-201ENST00000603667 216 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL136139.1-201ENST00000605568 222 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC024589.2-201ENST00000605642 1294 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AP003392.5-201ENST00000607857 415 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC105227.2-201ENST00000615075 605 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL157770.1-201ENST00000623049 439 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL353795.1-201ENST00000439134 1775 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC125232.1-201ENST00000452554 1408 ntBASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRAIPQ9BWF2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AL513185.3-201ENST00000433335 1300 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 MAPK10-270ENST00000641102 3538 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms