Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.5□□□□□ -1.85
Clp1Q99LI9 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm24068-201ENSMUST00000104513 132 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm12213-201ENSMUST00000119924 353 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm23671-201ENSMUST00000157472 103 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm26214-201ENSMUST00000158581 107 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm25071-201ENSMUST00000175232 70 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.49□□□□□ -1.85
Clp1Q99LI9 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Clp1Q99LI9 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Clp1Q99LI9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Clp1Q99LI9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Clp1Q99LI9 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Clp1Q99LI9 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Clp1Q99LI9 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm6952-201ENSMUST00000118629 159 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm13913-201ENSMUST00000121126 260 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm23858-201ENSMUST00000158384 106 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Mir1966-201ENSMUST00000158807 108 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm16546-201ENSMUST00000159442 355 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Mir7014-201ENSMUST00000183853 63 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm27893-201ENSMUST00000184408 194 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm43264-201ENSMUST00000202284 325 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm44223-201ENSMUST00000204854 114 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm5010-201ENSMUST00000213131 260 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.48□□□□□ -1.85
Clp1Q99LI9 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.48□□□□□ -1.85
Clp1Q99LI9 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Clp1Q99LI9 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Clp1Q99LI9 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Clp1Q99LI9 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Clp1Q99LI9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Clp1Q99LI9 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Clp1Q99LI9 Mir374b-201ENSMUST00000102314 95 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 Gm24263-201ENSMUST00000104059 107 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 Gm24787-201ENSMUST00000157380 123 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 Gm6788-201ENSMUST00000166459 270 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 Gm28159-201ENSMUST00000190296 696 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Clp1Q99LI9 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.47□□□□□ -1.85
Clp1Q99LI9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
Clp1Q99LI9 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Clp1Q99LI9 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Clp1Q99LI9 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.46□□□□□ -1.86
Clp1Q99LI9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.46□□□□□ -1.86
Clp1Q99LI9 Gm44482-201ENSMUST00000199232 103 ntBASIC3.46□□□□□ -1.86
Clp1Q99LI9 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.46□□□□□ -1.86
Clp1Q99LI9 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.46□□□□□ -1.86
Clp1Q99LI9 Gm24929-201ENSMUST00000083403 139 ntBASIC3.46□□□□□ -1.86
Clp1Q99LI9 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Clp1Q99LI9 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Clp1Q99LI9 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Clp1Q99LI9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Clp1Q99LI9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Clp1Q99LI9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 Gm22586-201ENSMUST00000157507 122 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 Gm22187-201ENSMUST00000157819 129 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 Gm25920-201ENSMUST00000158307 99 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 Gm22699-201ENSMUST00000175376 105 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 Mir3965-201ENSMUST00000175570 69 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.45□□□□□ -1.86
Clp1Q99LI9 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.45□□□□□ -1.86
Clp1Q99LI9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Clp1Q99LI9 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Clp1Q99LI9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm15214-201ENSMUST00000122155 470 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm22557-201ENSMUST00000157804 102 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm26297-201ENSMUST00000179464 132 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm23966-201ENSMUST00000179823 107 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm27532-201ENSMUST00000183726 113 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm37428-201ENSMUST00000193886 137 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Gm45456-201ENSMUST00000210841 243 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Snora31-201ENSMUST00000083213 130 ntBASIC3.44□□□□□ -1.86
Clp1Q99LI9 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Clp1Q99LI9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.44□□□□□ -1.86
Clp1Q99LI9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Clp1Q99LI9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Clp1Q99LI9 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Clp1Q99LI9 Gm23015-201ENSMUST00000104145 128 ntBASIC3.43□□□□□ -1.86
Clp1Q99LI9 Gm26099-201ENSMUST00000157248 109 ntBASIC3.43□□□□□ -1.86
Clp1Q99LI9 Mir6715-201ENSMUST00000184990 57 ntBASIC3.43□□□□□ -1.86
Clp1Q99LI9 Gm6801-201ENSMUST00000190697 339 ntBASIC3.43□□□□□ -1.86
Clp1Q99LI9 Gm15235-201ENSMUST00000200572 194 ntBASIC3.43□□□□□ -1.86
Clp1Q99LI9 Mir340-201ENSMUST00000083483 98 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms