Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH13P55290 RPL7L1P3-201ENST00000455249 689 ntBASIC6.06□□□□□ -1.44
CDH13P55290 MTND3P6-201ENST00000485242 339 ntBASIC6.06□□□□□ -1.44
CDH13P55290 GM2AP2-201ENST00000491764 562 ntBASIC6.06□□□□□ -1.44
CDH13P55290 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH13P55290 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH13P55290 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH13P55290 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH13P55290 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH13P55290 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH13P55290 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 AC008055.1-201ENST00000547032 609 ntBASIC6.06□□□□□ -1.44
CDH13P55290 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH13P55290 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 AC027796.1-201ENST00000575593 512 ntBASIC6.06□□□□□ -1.44
CDH13P55290 MIR4732-201ENST00000581873 76 ntBASIC6.06□□□□□ -1.44
CDH13P55290 GLYATL1P2-202ENST00000588046 902 ntBASIC6.06□□□□□ -1.44
CDH13P55290 AC020916.2-201ENST00000591242 360 ntBASIC6.06□□□□□ -1.44
CDH13P55290 MIR6070-201ENST00000613967 103 ntBASIC6.06□□□□□ -1.44
CDH13P55290 MIR6503-201ENST00000622884 86 ntBASIC6.06□□□□□ -1.44
CDH13P55290 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH13P55290 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH13P55290 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH13P55290 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH13P55290 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH13P55290 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH13P55290 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH13P55290 OR7E25P-201ENST00000344844 931 ntBASIC6.05□□□□□ -1.44
CDH13P55290 SNORA43.1-201ENST00000364863 140 ntBASIC6.05□□□□□ -1.44
CDH13P55290 DHFRP2-201ENST00000414224 547 ntBASIC6.05□□□□□ -1.44
CDH13P55290 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 AC021876.1-201ENST00000425959 359 ntBASIC6.05□□□□□ -1.44
CDH13P55290 AC016027.5-201ENST00000427227 210 ntBASIC6.05□□□□□ -1.44
CDH13P55290 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH13P55290 NPM1P23-201ENST00000440193 849 ntBASIC6.05□□□□□ -1.44
CDH13P55290 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH13P55290 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH13P55290 RN7SL267P-201ENST00000485107 261 ntBASIC6.05□□□□□ -1.44
CDH13P55290 AC021146.10-201ENST00000515628 706 ntBASIC6.05□□□□□ -1.44
CDH13P55290 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH13P55290 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 RNU4ATAC-201ENST00000580972 127 ntBASIC6.05□□□□□ -1.44
CDH13P55290 AC024267.2-201ENST00000582737 417 ntBASIC6.05□□□□□ -1.44
CDH13P55290 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH13P55290 AC092944.2-201ENST00000605443 889 ntBASIC6.05□□□□□ -1.44
CDH13P55290 AL390877.1-201ENST00000605704 214 ntBASIC6.05□□□□□ -1.44
CDH13P55290 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH13P55290 AC020658.4-201ENST00000613987 684 ntBASIC6.05□□□□□ -1.44
CDH13P55290 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
CDH13P55290 AC068213.1-201ENST00000625124 226 ntBASIC6.05□□□□□ -1.44
CDH13P55290 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH13P55290 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH13P55290 AL133243.2-201ENST00000610331 1621 ntBASIC6.05□□□□□ -1.44
CDH13P55290 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
CDH13P55290 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH13P55290 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH13P55290 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CDH13P55290 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH13P55290 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH13P55290 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.04□□□□□ -1.44
CDH13P55290 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH13P55290 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH13P55290 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDH13P55290 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 ARSFP1-201ENST00000398758 477 ntBASIC6.04□□□□□ -1.44
CDH13P55290 RPL23AP17-201ENST00000401064 499 ntBASIC6.04□□□□□ -1.44
CDH13P55290 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 RPS26P38-201ENST00000414476 348 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC002127.1-201ENST00000421305 225 ntBASIC6.04□□□□□ -1.44
CDH13P55290 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH13P55290 BX679664.2-201ENST00000439282 283 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC234771.4-201ENST00000441416 730 ntBASIC6.04□□□□□ -1.44
CDH13P55290 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.04□□□□□ -1.44
CDH13P55290 RARRES2P3-201ENST00000457739 473 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms