Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm26077-201ENSMUST00000104064 123 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm6954-201ENSMUST00000117416 225 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm12213-201ENSMUST00000119924 353 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm5396-201ENSMUST00000121222 532 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm24911-201ENSMUST00000157292 136 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm22315-201ENSMUST00000158010 143 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm25470-201ENSMUST00000175576 111 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm24388-201ENSMUST00000177872 107 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm27761-201ENSMUST00000184091 131 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm37037-201ENSMUST00000194475 424 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm43991-201ENSMUST00000203751 274 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm22294-201ENSMUST00000083308 104 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Mir410-201ENSMUST00000083563 81 ntBASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
Nkx2-4Q9EQM3 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Snord53-201ENSMUST00000175146 78 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Gm46997-201ENSMUST00000222108 217 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Gm23264-201ENSMUST00000083372 107 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Mir222-201ENSMUST00000083537 79 ntBASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Nkx2-4Q9EQM3 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Mir1b-201ENSMUST00000117012 122 ntBASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Gm25625-201ENSMUST00000157221 96 ntBASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Mir6399-201ENSMUST00000184050 84 ntBASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Gm9795-201ENSMUST00000062156 693 ntBASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Gm22978-201ENSMUST00000082607 160 ntBASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.53□□□□□ -2
Nkx2-4Q9EQM3 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Nkx2-4Q9EQM3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm23010-201ENSMUST00000104151 126 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25526-201ENSMUST00000104332 132 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm26249-201ENSMUST00000116708 118 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24907-201ENSMUST00000116932 128 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm11285-201ENSMUST00000118443 322 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm11253-201ENSMUST00000118486 201 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25020-201ENSMUST00000178071 107 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25457-201ENSMUST00000179509 107 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22621-201ENSMUST00000179678 74 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Mir8103-201ENSMUST00000183945 107 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm28647-201ENSMUST00000188416 197 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm37089-201ENSMUST00000195616 129 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm5899-201ENSMUST00000071770 270 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm6030-201ENSMUST00000078768 402 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.52□□□□□ -2.01
Nkx2-4Q9EQM3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm12686-201ENSMUST00000120546 397 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm12815-201ENSMUST00000121737 135 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm23640-201ENSMUST00000157860 104 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24729-201ENSMUST00000158225 137 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22118-201ENSMUST00000175593 171 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm23289-201ENSMUST00000175615 108 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm27271-201ENSMUST00000183509 170 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Mir6336-201ENSMUST00000183581 130 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Trbv6-201ENSMUST00000193743 276 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm43587-201ENSMUST00000199590 204 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm44024-201ENSMUST00000203008 476 ntBASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx2-4Q9EQM3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24116-201ENSMUST00000103975 107 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25938-201ENSMUST00000104139 166 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25565-201ENSMUST00000104605 105 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22027-201ENSMUST00000122737 127 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25333-201ENSMUST00000158035 246 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22537-201ENSMUST00000158172 199 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24736-201ENSMUST00000158862 130 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm26287-201ENSMUST00000158887 81 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm7592-201ENSMUST00000160674 627 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm27694-201ENSMUST00000184740 86 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm37715-201ENSMUST00000193206 235 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Mir465d-201ENSMUST00000196314 58 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms