Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.85□□□□□ -1.95
Gjb1P28230 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.85□□□□□ -1.95
Gjb1P28230 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Gjb1P28230 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm24423-201ENSMUST00000101982 106 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Mir693-201ENSMUST00000102187 89 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Mir881-201ENSMUST00000104844 78 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm13756-201ENSMUST00000117618 222 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm16533-201ENSMUST00000140035 228 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Gjb1P28230 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.84□□□□□ -1.95
Gjb1P28230 Gm26287-201ENSMUST00000158887 81 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm24818-201ENSMUST00000175093 161 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Snord53-201ENSMUST00000175146 78 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm27545-201ENSMUST00000184755 202 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm43991-201ENSMUST00000203751 274 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm45859-201ENSMUST00000212794 214 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Gjb1P28230 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Gjb1P28230 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.84□□□□□ -1.95
Gjb1P28230 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Gjb1P28230 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.83□□□□□ -1.96
Gjb1P28230 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Gjb1P28230 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Gjb1P28230 Gm24126-201ENSMUST00000104111 106 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm25938-201ENSMUST00000104139 166 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm24890-201ENSMUST00000104389 102 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.83□□□□□ -1.96
Gjb1P28230 Gm26277-201ENSMUST00000157097 152 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm23588-201ENSMUST00000157659 99 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm23640-201ENSMUST00000157860 104 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm20630-201ENSMUST00000177387 551 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm24388-201ENSMUST00000177872 107 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Mir6399-201ENSMUST00000184050 84 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Mir465d-201ENSMUST00000196314 58 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.83□□□□□ -1.96
Gjb1P28230 Gm45150-201ENSMUST00000206051 467 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Gm23264-201ENSMUST00000083372 107 ntBASIC2.83□□□□□ -1.96
Gjb1P28230 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
Gjb1P28230 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Gjb1P28230 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Gjb1P28230 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Gjb1P28230 Gm14846-201ENSMUST00000121868 216 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm23470-201ENSMUST00000157129 120 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm22321-201ENSMUST00000157152 104 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm22215-201ENSMUST00000157558 96 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm25664-201ENSMUST00000157697 107 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm22537-201ENSMUST00000158172 199 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm25749-201ENSMUST00000175485 111 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm29005-201ENSMUST00000186773 320 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.82□□□□□ -1.96
Gjb1P28230 Gm38311-201ENSMUST00000192945 165 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.82□□□□□ -1.96
Gjb1P28230 Gm9251-201ENSMUST00000197202 628 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.82□□□□□ -1.96
Gjb1P28230 Gm44459-201ENSMUST00000203926 160 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.82□□□□□ -1.96
Gjb1P28230 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.82□□□□□ -1.96
Gjb1P28230 Gm22978-201ENSMUST00000082607 160 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Gm25930-201ENSMUST00000082785 107 ntBASIC2.82□□□□□ -1.96
Gjb1P28230 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Gjb1P28230 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Gjb1P28230 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Gjb1P28230 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Gjb1P28230 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Gjb1P28230 Gm26077-201ENSMUST00000104064 123 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Gm12941-201ENSMUST00000117934 220 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Gm12550-201ENSMUST00000118478 329 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Gm24053-201ENSMUST00000158620 105 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Gm23289-201ENSMUST00000175615 108 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Gjb1P28230 Mir7225-201ENSMUST00000184178 54 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Gm29167-201ENSMUST00000190024 377 ntBASIC2.81□□□□□ -1.96
Gjb1P28230 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.81□□□□□ -1.96
Gjb1P28230 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gjb1P28230 Gm12042-201ENSMUST00000120479 301 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm23982-201ENSMUST00000157141 106 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm25625-201ENSMUST00000157221 96 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm23409-201ENSMUST00000158516 237 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm7592-201ENSMUST00000160674 627 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm7582-201ENSMUST00000160831 603 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm25457-201ENSMUST00000179509 107 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm27271-201ENSMUST00000183509 170 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm27540-201ENSMUST00000184950 187 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm42672-201ENSMUST00000197821 352 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm44408-201ENSMUST00000200205 66 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Gm44853-201ENSMUST00000209070 250 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.8□□□□□ -1.96
Gjb1P28230 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.8□□□□□ -1.96
Gjb1P28230 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms