Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm37050-201ENSMUST00000193464 466 ntBASIC3.75□□□□□ -1.81
Nubp1Q9R060 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.75□□□□□ -1.81
Nubp1Q9R060 Gm44921-201ENSMUST00000205290 301 ntBASIC3.75□□□□□ -1.81
Nubp1Q9R060 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.75□□□□□ -1.81
Nubp1Q9R060 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Nubp1Q9R060 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Nubp1Q9R060 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Nubp1Q9R060 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm15069-201ENSMUST00000117792 192 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm13831-201ENSMUST00000118764 302 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm15068-201ENSMUST00000119796 192 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm25104-201ENSMUST00000122476 163 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm25908-201ENSMUST00000157624 98 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Mir1927-201ENSMUST00000158579 109 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm25364-201ENSMUST00000158851 107 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm19774-201ENSMUST00000190667 114 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm45288-201ENSMUST00000210236 151 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 CT009696.1-201ENSMUST00000215745 256 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 CT033781.2-201ENSMUST00000221113 153 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm25513-201ENSMUST00000083861 162 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Nubp1Q9R060 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.74□□□□□ -1.81
Nubp1Q9R060 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nubp1Q9R060 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm24119-201ENSMUST00000103979 246 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm24788-201ENSMUST00000104283 156 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm11566-201ENSMUST00000118550 203 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm25488-201ENSMUST00000158728 118 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm25367-201ENSMUST00000158846 106 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm27792-201ENSMUST00000184031 115 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm28159-201ENSMUST00000190296 696 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm44482-201ENSMUST00000199232 103 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm23509-201ENSMUST00000083080 160 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.73□□□□□ -1.81
Nubp1Q9R060 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Nubp1Q9R060 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nubp1Q9R060 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Nubp1Q9R060 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm14568-201ENSMUST00000119321 294 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm8200-201ENSMUST00000122390 222 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm26347-201ENSMUST00000157526 131 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm23755-201ENSMUST00000157578 343 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm23496-201ENSMUST00000157741 248 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Snord11-201ENSMUST00000158468 84 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm43239-201ENSMUST00000200131 201 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.72□□□□□ -1.81
Nubp1Q9R060 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm16976-205ENSMUST00000227324 226 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm22251-201ENSMUST00000083216 107 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nubp1Q9R060 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.72□□□□□ -1.81
Nubp1Q9R060 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
Nubp1Q9R060 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Nubp1Q9R060 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nubp1Q9R060 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nubp1Q9R060 Gm44489-201ENSMUST00000104619 97 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 Gm13246-201ENSMUST00000120994 315 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 Gm45791-201ENSMUST00000212908 352 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 Gm9370-201ENSMUST00000222787 609 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 Mir215-201ENSMUST00000083628 112 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nubp1Q9R060 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nubp1Q9R060 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nubp1Q9R060 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nubp1Q9R060 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nubp1Q9R060 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.71□□□□□ -1.82
Nubp1Q9R060 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nubp1Q9R060 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm14586-201ENSMUST00000119571 408 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm13862-201ENSMUST00000121220 197 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm23112-201ENSMUST00000158606 125 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm22108-201ENSMUST00000177961 106 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm24798-201ENSMUST00000179334 106 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Mir6350-201ENSMUST00000183639 105 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm28155-201ENSMUST00000191066 151 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm44032-201ENSMUST00000204841 166 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms