Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ushbp1Q8R370 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm22782-201ENSMUST00000104082 132 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Mir1b-201ENSMUST00000117012 122 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm14838-201ENSMUST00000118913 248 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm24443-201ENSMUST00000157242 132 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm25280-201ENSMUST00000157269 101 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm22145-201ENSMUST00000157396 148 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Mir3076-201ENSMUST00000175415 60 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Mir5118-201ENSMUST00000175551 67 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm22450-201ENSMUST00000179641 107 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm25473-201ENSMUST00000180191 107 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm25528-201ENSMUST00000180264 132 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm27699-201ENSMUST00000183553 180 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm27421-201ENSMUST00000184729 167 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm45452-201ENSMUST00000210905 177 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm24856-201ENSMUST00000082809 107 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm26071-201ENSMUST00000083261 107 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Gm24521-201ENSMUST00000083958 107 ntBASIC3.12□□□□□ -1.91
Ushbp1Q8R370 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm23766-201ENSMUST00000103894 80 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm26247-201ENSMUST00000116702 91 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm12797-201ENSMUST00000118645 273 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm22316-201ENSMUST00000158012 216 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm27379-201ENSMUST00000183730 123 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Mir6405-201ENSMUST00000184584 124 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm6060-201ENSMUST00000188671 251 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm6801-201ENSMUST00000190697 339 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm37037-201ENSMUST00000194475 424 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm43193-201ENSMUST00000197732 441 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm44533-201ENSMUST00000207782 268 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ushbp1Q8R370 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm12417-201ENSMUST00000119153 403 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm15162-201ENSMUST00000119325 283 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm25153-201ENSMUST00000157118 156 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm23982-201ENSMUST00000157141 106 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm25720-201ENSMUST00000157503 105 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm22330-201ENSMUST00000158068 115 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm24392-201ENSMUST00000158136 103 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm25654-201ENSMUST00000158467 88 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm23409-201ENSMUST00000158516 237 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm24736-201ENSMUST00000158862 130 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm24667-201ENSMUST00000158938 103 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm25024-201ENSMUST00000179667 104 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm34314-201ENSMUST00000203622 367 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Gm24356-201ENSMUST00000082859 106 ntBASIC3.1□□□□□ -1.91
Ushbp1Q8R370 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm12550-201ENSMUST00000118478 329 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm12513-201ENSMUST00000118617 352 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm25390-201ENSMUST00000157341 103 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm23589-201ENSMUST00000157660 105 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm22842-201ENSMUST00000157709 118 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Snord53-201ENSMUST00000175146 78 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm25470-201ENSMUST00000175576 111 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Mir6540-201ENSMUST00000184886 108 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm38311-201ENSMUST00000192945 165 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.09□□□□□ -1.91
Ushbp1Q8R370 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm26458-201ENSMUST00000082832 128 ntBASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Ushbp1Q8R370 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm24867-201ENSMUST00000104161 107 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm14803-201ENSMUST00000117163 361 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm16171-201ENSMUST00000118004 324 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm14922-201ENSMUST00000121131 163 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm22537-201ENSMUST00000158172 199 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm24006-201ENSMUST00000158462 132 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm22858-201ENSMUST00000174972 76 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm24816-201ENSMUST00000175311 151 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Mir465d-201ENSMUST00000196314 58 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm15235-201ENSMUST00000200572 194 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ushbp1Q8R370 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm23011-201ENSMUST00000104148 132 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms