Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a1Q04857 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a1Q04857 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a1Q04857 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a1Q04857 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm24787-201ENSMUST00000157380 123 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Mir21b-201ENSMUST00000184317 108 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm28030-201ENSMUST00000184987 138 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Mir8090-201ENSMUST00000185078 136 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm29005-201ENSMUST00000186773 320 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm22299-201ENSMUST00000082663 136 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm24355-201ENSMUST00000082858 122 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Snora70-201ENSMUST00000083047 137 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm22421-201ENSMUST00000083058 107 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.61□□□□□ -1.83
Col6a1Q04857 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Col6a1Q04857 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm11460-201ENSMUST00000118200 361 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm16289-201ENSMUST00000162079 183 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm17522-201ENSMUST00000178144 498 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a1Q04857 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm37428-201ENSMUST00000193886 137 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 Trbv18-201ENSMUST00000194256 294 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm25789-201ENSMUST00000083294 76 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.6□□□□□ -1.83
Col6a1Q04857 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a1Q04857 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col6a1Q04857 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a1Q04857 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Col6a1Q04857 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm23320-201ENSMUST00000104462 127 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Mir1298-201ENSMUST00000116681 98 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm13167-201ENSMUST00000118554 578 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm24691-201ENSMUST00000157762 140 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm29308-201ENSMUST00000188863 315 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm28537-201ENSMUST00000189026 315 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm29631-201ENSMUST00000191065 315 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm42988-201ENSMUST00000198116 225 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm24350-202ENSMUST00000198309 132 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm25987-201ENSMUST00000083234 107 ntBASIC3.59□□□□□ -1.83
Col6a1Q04857 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a1Q04857 Gm22557-201ENSMUST00000157804 102 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Gm23260-201ENSMUST00000158317 172 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Gm37281-201ENSMUST00000192412 439 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Gm44338-201ENSMUST00000198614 110 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Gm25856-201ENSMUST00000082786 75 ntBASIC3.58□□□□□ -1.84
Col6a1Q04857 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a1Q04857 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Col6a1Q04857 Mir669b-201ENSMUST00000102172 97 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm25980-201ENSMUST00000157176 218 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm27396-201ENSMUST00000157708 58 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm24054-201ENSMUST00000158619 105 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm23337-201ENSMUST00000158959 118 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Mir6370-201ENSMUST00000183510 120 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm45687-201ENSMUST00000209454 155 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm45445-201ENSMUST00000209586 232 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm4945-201ENSMUST00000075152 453 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm24929-201ENSMUST00000083403 139 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm26327-201ENSMUST00000093724 111 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.57□□□□□ -1.84
Col6a1Q04857 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a1Q04857 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.57□□□□□ -1.84
Col6a1Q04857 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a1Q04857 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Col6a1Q04857 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a1Q04857 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a1Q04857 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm22373-201ENSMUST00000104584 89 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm13761-201ENSMUST00000117238 807 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm15183-201ENSMUST00000118933 348 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm22722-201ENSMUST00000157467 132 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm22833-201ENSMUST00000158292 132 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm22075-201ENSMUST00000158599 192 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Trbv7-201ENSMUST00000193339 402 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm5010-201ENSMUST00000213131 260 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms