Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RPS3AP44-201ENST00000425466 790 ntBASIC7.99□□□□□ -1.13
LIG1P18858 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 PSMA6P2-201ENST00000457574 686 ntBASIC7.99□□□□□ -1.13
LIG1P18858 RARRES2P3-201ENST00000457739 473 ntBASIC7.99□□□□□ -1.13
LIG1P18858 CBX5P1-201ENST00000468470 561 ntBASIC7.99□□□□□ -1.13
LIG1P18858 RN7SL456P-201ENST00000469290 295 ntBASIC7.99□□□□□ -1.13
LIG1P18858 AP005202.1-201ENST00000489915 867 ntBASIC7.99□□□□□ -1.13
LIG1P18858 RN7SL775P-201ENST00000498361 336 ntBASIC7.99□□□□□ -1.13
LIG1P18858 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC7.99□□□□□ -1.13
LIG1P18858 AC139713.1-202ENST00000512366 460 ntBASIC7.99□□□□□ -1.13
LIG1P18858 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 OR56A7P-201ENST00000524865 941 ntBASIC7.99□□□□□ -1.13
LIG1P18858 OR10V3P-201ENST00000525712 725 ntBASIC7.99□□□□□ -1.13
LIG1P18858 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.99□□□□□ -1.13
LIG1P18858 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC7.99□□□□□ -1.13
LIG1P18858 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 AP000919.1-202ENST00000581139 1264 ntBASIC7.99□□□□□ -1.13
LIG1P18858 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 AC084373.1-201ENST00000603311 235 ntBASIC7.99□□□□□ -1.13
LIG1P18858 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 AC111186.1-201ENST00000604684 130 ntBASIC7.99□□□□□ -1.13
LIG1P18858 AL513218.1-201ENST00000606527 391 ntBASIC7.99□□□□□ -1.13
LIG1P18858 AC113361.1-201ENST00000606683 543 ntBASIC7.99□□□□□ -1.13
LIG1P18858 MIR1264-201ENST00000616374 69 ntBASIC7.99□□□□□ -1.13
LIG1P18858 AC131009.3-201ENST00000621809 287 ntBASIC7.99□□□□□ -1.13
LIG1P18858 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 AC007347.2-201ENST00000623044 180 ntBASIC7.99□□□□□ -1.13
LIG1P18858 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LIG1P18858 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 MFSD8-256ENST00000641949 1640 ntBASIC7.99□□□□□ -1.13
LIG1P18858 TCP1P3-201ENST00000414406 1498 ntBASIC7.99□□□□□ -1.13
LIG1P18858 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
LIG1P18858 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 AL137058.3-201ENST00000624531 3099 ntBASIC7.99□□□□□ -1.13
LIG1P18858 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
LIG1P18858 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 CCDC150P1-201ENST00000537123 2215 ntBASIC7.98□□□□□ -1.13
LIG1P18858 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
LIG1P18858 MIR16-2-201ENST00000362117 81 ntBASIC7.98□□□□□ -1.13
LIG1P18858 Y_RNA.169-201ENST00000363745 96 ntBASIC7.98□□□□□ -1.13
LIG1P18858 RNU6-354P-201ENST00000383862 107 ntBASIC7.98□□□□□ -1.13
LIG1P18858 RNU6-610P-201ENST00000384264 107 ntBASIC7.98□□□□□ -1.13
LIG1P18858 HMGB3P19-201ENST00000403971 560 ntBASIC7.98□□□□□ -1.13
LIG1P18858 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.98□□□□□ -1.13
LIG1P18858 RN7SKP117-201ENST00000410175 264 ntBASIC7.98□□□□□ -1.13
LIG1P18858 RN7SKP97-201ENST00000410966 333 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 BX664727.1-201ENST00000416024 466 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 AC010153.1-201ENST00000432862 727 ntBASIC7.98□□□□□ -1.13
LIG1P18858 GAPDHP75-201ENST00000433910 943 ntBASIC7.98□□□□□ -1.13
LIG1P18858 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 MED6P1-201ENST00000439659 713 ntBASIC7.98□□□□□ -1.13
LIG1P18858 DBIL5P2-201ENST00000443827 253 ntBASIC7.98□□□□□ -1.13
LIG1P18858 TXNP2-201ENST00000443918 295 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 OFD1P7Y-201ENST00000454643 1155 ntBASIC7.98□□□□□ -1.13
LIG1P18858 RPS4XP19-201ENST00000460237 736 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 AC008379.1-201ENST00000463655 464 ntBASIC7.98□□□□□ -1.13
LIG1P18858 SETP6-201ENST00000479329 568 ntBASIC7.98□□□□□ -1.13
LIG1P18858 SYT14P1-201ENST00000481459 721 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC7.98□□□□□ -1.13
LIG1P18858 EEF1B2P2-201ENST00000519625 676 ntBASIC7.98□□□□□ -1.13
LIG1P18858 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms