Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 Vault.2-201ENST00000516519 98 ntBASIC6.86□□□□□ -1.31
FOXN3O00409 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.86□□□□□ -1.31
FOXN3O00409 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.86□□□□□ -1.31
FOXN3O00409 OR10D4P-201ENST00000525892 951 ntBASIC6.86□□□□□ -1.31
FOXN3O00409 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.86□□□□□ -1.31
FOXN3O00409 NPM1P5-201ENST00000557228 838 ntBASIC6.86□□□□□ -1.31
FOXN3O00409 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.86□□□□□ -1.31
FOXN3O00409 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.86□□□□□ -1.31
FOXN3O00409 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.86□□□□□ -1.31
FOXN3O00409 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.86□□□□□ -1.31
FOXN3O00409 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.86□□□□□ -1.31
FOXN3O00409 AC092953.2-201ENST00000608000 699 ntBASIC6.86□□□□□ -1.31
FOXN3O00409 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
FOXN3O00409 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
FOXN3O00409 AC006511.3-201ENST00000624929 1783 ntBASIC6.86□□□□□ -1.31
FOXN3O00409 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXN3O00409 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
FOXN3O00409 ZNF402P-201ENST00000404435 3100 ntBASIC6.86□□□□□ -1.31
FOXN3O00409 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.86□□□□□ -1.31
FOXN3O00409 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXN3O00409 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
FOXN3O00409 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
FOXN3O00409 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXN3O00409 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
FOXN3O00409 AC022507.1-201ENST00000548349 1505 ntBASIC6.86□□□□□ -1.31
FOXN3O00409 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
FOXN3O00409 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.85□□□□□ -1.31
FOXN3O00409 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.85□□□□□ -1.31
FOXN3O00409 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
FOXN3O00409 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
FOXN3O00409 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
FOXN3O00409 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 RNA5SP478-201ENST00000364657 115 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 AL033519.1-201ENST00000407266 307 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 RN7SKP221-201ENST00000410420 301 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.85□□□□□ -1.31
FOXN3O00409 AL157884.1-201ENST00000424561 454 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.85□□□□□ -1.31
FOXN3O00409 MTND4LP14-201ENST00000429447 288 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 MRPS33P4-201ENST00000434892 317 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.85□□□□□ -1.31
FOXN3O00409 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.85□□□□□ -1.31
FOXN3O00409 RN7SL165P-201ENST00000477476 291 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 RPL17P2-201ENST00000491913 451 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.85□□□□□ -1.31
FOXN3O00409 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.85□□□□□ -1.31
FOXN3O00409 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.85□□□□□ -1.31
FOXN3O00409 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.85□□□□□ -1.31
FOXN3O00409 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.85□□□□□ -1.31
FOXN3O00409 AC036176.3-201ENST00000602456 418 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 U91328.4-201ENST00000608919 517 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
FOXN3O00409 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 AL391262.2-201ENST00000622466 494 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 AC004836.1-201ENST00000623032 634 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
FOXN3O00409 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
FOXN3O00409 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.85□□□□□ -1.31
FOXN3O00409 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 AC011369.2-201ENST00000624423 1567 ntBASIC6.85□□□□□ -1.31
FOXN3O00409 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXN3O00409 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXN3O00409 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 AC119674.1-213ENST00000641177 1386 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 GUCY1B2-204ENST00000531898 1979 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.84□□□□□ -1.31
FOXN3O00409 AC087565.3-202ENST00000642085 1603 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 SNORD8-201ENST00000363915 110 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AL353625.1-202ENST00000366273 571 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AL357078.2-201ENST00000416486 427 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 AL139184.1-202ENST00000422303 222 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 RNF19BPX-201ENST00000426224 625 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AC234771.4-201ENST00000441416 730 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXN3O00409 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.84□□□□□ -1.31
FOXN3O00409 RN7SL413P-201ENST00000482700 297 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AC018639.1-201ENST00000492994 442 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXN3O00409 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 MTND3P3-201ENST00000505004 126 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 333.6 ms