Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm10360-201ENSMUST00000097219 272 ntBASIC1.78□□□□□ -2.12
Trav5-4A0A075B652 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm26015-201ENSMUST00000104402 125 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm22447-201ENSMUST00000158155 92 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Mir1936-201ENSMUST00000158699 93 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm23548-201ENSMUST00000158963 106 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm37081-201ENSMUST00000192034 196 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Mir497-201ENSMUST00000200557 84 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm5899-201ENSMUST00000071770 270 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Mir496a-201ENSMUST00000093627 79 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav5-4A0A075B652 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm24274-201ENSMUST00000116787 124 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm11854-201ENSMUST00000117839 446 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm24504-201ENSMUST00000157679 100 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm24770-201ENSMUST00000158505 92 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Mir3092-201ENSMUST00000174954 96 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm26435-201ENSMUST00000179026 107 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm29229-201ENSMUST00000188874 323 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm43976-201ENSMUST00000203637 235 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm44687-201ENSMUST00000204975 235 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm23404-201ENSMUST00000082543 97 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm24356-201ENSMUST00000082859 106 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm24805-201ENSMUST00000082931 104 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm22364-201ENSMUST00000083097 98 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm25578-201ENSMUST00000083406 104 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.76□□□□□ -2.13
Trav5-4A0A075B652 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 U6.1-201ENSMUST00000157443 101 ntBASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 Gm22075-201ENSMUST00000158599 192 ntBASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 Gm26400-201ENSMUST00000175012 85 ntBASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 Gm23813-201ENSMUST00000175153 77 ntBASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 Gm23793-201ENSMUST00000179396 117 ntBASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.75□□□□□ -2.13
Trav5-4A0A075B652 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm14674-201ENSMUST00000117816 342 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm26150-201ENSMUST00000157426 151 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm24851-201ENSMUST00000158028 103 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm25863-201ENSMUST00000158249 329 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm23854-201ENSMUST00000158378 108 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm22159-201ENSMUST00000158412 130 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm26405-201ENSMUST00000158495 100 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm23181-201ENSMUST00000158685 110 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm17067-202ENSMUST00000180131 123 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm27511-201ENSMUST00000183502 127 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Mir6388-201ENSMUST00000184417 75 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm9156-201ENSMUST00000189660 463 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm43431-201ENSMUST00000198577 340 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm43578-201ENSMUST00000201250 459 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Gm45344-201ENSMUST00000211610 341 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Snora69-201ENSMUST00000083708 131 ntBASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trav5-4A0A075B652 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm25376-201ENSMUST00000104340 133 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm15526-201ENSMUST00000112504 204 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm9059-201ENSMUST00000118319 183 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm14980-201ENSMUST00000121247 736 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm25805-201ENSMUST00000122788 108 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm25371-201ENSMUST00000158162 101 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Rnu7-201ENSMUST00000158458 62 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm27271-201ENSMUST00000183509 170 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm29657-201ENSMUST00000189807 342 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Mir7021-201ENSMUST00000197026 63 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm43035-201ENSMUST00000197626 517 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Gm45456-201ENSMUST00000210841 243 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Snord118-201ENSMUST00000082965 135 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trav5-4A0A075B652 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms