Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm23988-201ENSMUST00000117034 122 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm22666-201ENSMUST00000158717 164 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm22118-201ENSMUST00000175593 171 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm28848-201ENSMUST00000189984 168 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm43991-201ENSMUST00000203751 274 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ushbp1Q8R370 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Mir297a-2-201ENSMUST00000103795 90 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Mir872-201ENSMUST00000104728 81 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Mdga2-203ENSMUST00000113942 423 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm23841-201ENSMUST00000116951 114 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm23892-201ENSMUST00000158105 130 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm22382-201ENSMUST00000158185 130 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm23476-201ENSMUST00000158881 274 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm23268-201ENSMUST00000175494 78 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm29657-201ENSMUST00000189807 342 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm44526-201ENSMUST00000204664 121 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.17□□□□□ -1.9
Ushbp1Q8R370 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm10025-201ENSMUST00000079568 372 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm25930-201ENSMUST00000082785 107 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm22294-201ENSMUST00000083308 104 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Ushbp1Q8R370 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm25466-201ENSMUST00000103995 132 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm22784-201ENSMUST00000104088 132 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm15846-201ENSMUST00000116022 320 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm13992-201ENSMUST00000120558 156 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm23588-201ENSMUST00000157659 99 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Snord93-201ENSMUST00000175580 71 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm22911-201ENSMUST00000177920 107 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm25235-201ENSMUST00000179933 107 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm44308-201ENSMUST00000197080 99 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm44459-201ENSMUST00000203926 160 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm20734-201ENSMUST00000216939 193 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.16□□□□□ -1.9
Ushbp1Q8R370 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ushbp1Q8R370 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm23911-201ENSMUST00000104596 134 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm6574-201ENSMUST00000120037 362 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm12721-201ENSMUST00000120621 268 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm15272-201ENSMUST00000120865 233 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm14402-201ENSMUST00000122217 508 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm7209-201ENSMUST00000122339 333 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm25269-201ENSMUST00000122601 104 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm23640-201ENSMUST00000157860 104 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm25454-201ENSMUST00000157947 315 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm23895-201ENSMUST00000158108 160 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm7582-201ENSMUST00000160831 603 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm28453-203ENSMUST00000187041 189 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Mir3068-202ENSMUST00000197755 79 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.15□□□□□ -1.91
Ushbp1Q8R370 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm24116-201ENSMUST00000103975 107 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm23202-201ENSMUST00000104376 129 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm13432-201ENSMUST00000118861 241 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm5396-201ENSMUST00000121222 532 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm25543-201ENSMUST00000122678 312 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm22027-201ENSMUST00000122737 127 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm25805-201ENSMUST00000122788 108 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm16533-201ENSMUST00000140035 228 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm22321-201ENSMUST00000157152 104 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm22500-201ENSMUST00000158982 99 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Gm19123-201ENSMUST00000190716 651 ntBASIC3.14□□□□□ -1.91
Ushbp1Q8R370 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ushbp1Q8R370 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ushbp1Q8R370 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.13□□□□□ -1.91
Ushbp1Q8R370 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.13□□□□□ -1.91
Ushbp1Q8R370 Mir541-201ENSMUST00000102097 90 ntBASIC3.13□□□□□ -1.91
Ushbp1Q8R370 Gm24911-201ENSMUST00000157292 136 ntBASIC3.13□□□□□ -1.91
Ushbp1Q8R370 Gm5224-201ENSMUST00000183060 350 ntBASIC3.13□□□□□ -1.91
Ushbp1Q8R370 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.13□□□□□ -1.91
Ushbp1Q8R370 Gm9174-201ENSMUST00000078149 255 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms