Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 AC174457.1-201ENSMUST00000215932 226 ntBASIC4.24□□□□□ -1.73
Ddx54Q8K4L0 AC122418.1-201ENSMUST00000225012 511 ntBASIC4.24□□□□□ -1.73
Ddx54Q8K4L0 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ddx54Q8K4L0 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.24□□□□□ -1.73
Ddx54Q8K4L0 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ddx54Q8K4L0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Gm25485-201ENSMUST00000104120 132 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Gm24283-201ENSMUST00000104233 107 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Gm22500-201ENSMUST00000158982 99 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Snora2b-201ENSMUST00000084005 137 ntBASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.23□□□□□ -1.73
Ddx54Q8K4L0 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Gm24892-201ENSMUST00000122747 104 ntBASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Mir28a-201ENSMUST00000083560 86 ntBASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx54Q8K4L0 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Gm24717-201ENSMUST00000157522 124 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Mir5118-201ENSMUST00000175551 67 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Gm28650-201ENSMUST00000188413 411 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Gm22421-201ENSMUST00000083058 107 ntBASIC4.21□□□□□ -1.74
Ddx54Q8K4L0 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Gm14586-201ENSMUST00000119571 408 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Gm22213-201ENSMUST00000157564 119 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Gm26001-201ENSMUST00000157989 103 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Mir6370-201ENSMUST00000183510 120 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Gm25142-201ENSMUST00000082698 107 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Mir208a-201ENSMUST00000083498 83 ntBASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Ddx54Q8K4L0 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm11460-201ENSMUST00000118200 361 ntBASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm22666-201ENSMUST00000158717 164 ntBASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm37431-201ENSMUST00000195102 111 ntBASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm43899-201ENSMUST00000203675 246 ntBASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm18000-201ENSMUST00000212153 800 ntBASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm25789-201ENSMUST00000083294 76 ntBASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm22681-201ENSMUST00000083853 106 ntBASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Ddx54Q8K4L0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Gm23960-201ENSMUST00000157206 131 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Gm23644-201ENSMUST00000157856 77 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Gm25267-201ENSMUST00000158522 63 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Gm23053-201ENSMUST00000175136 96 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Snord92-201ENSMUST00000175548 85 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Mir7009-201ENSMUST00000184519 64 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Gm19366-201ENSMUST00000206996 156 ntBASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.18□□□□□ -1.74
Ddx54Q8K4L0 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Snord14c-201ENSMUST00000101927 86 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Gm22477-201ENSMUST00000122569 316 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Gm24937-201ENSMUST00000122597 134 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Gm24926-201ENSMUST00000178053 79 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Gm22632-201ENSMUST00000178266 79 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Mir6399-201ENSMUST00000184050 84 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Gm26265-202ENSMUST00000196326 133 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Gm43602-201ENSMUST00000196772 300 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ddx54Q8K4L0 Gm45393-201ENSMUST00000211634 2631 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms