Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Mir3970-201ENSMUST00000199287 90 ntBASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm43746-201ENSMUST00000200028 317 ntBASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC183096.1-201ENSMUST00000226392 130 ntBASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24698-201ENSMUST00000083883 130 ntBASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24164-201ENSMUST00000093663 104 ntBASIC1.9□□□□□ -2.11
Trav13n-2A0A0G2JF93 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm26154-201ENSMUST00000102339 96 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm13443-201ENSMUST00000120770 555 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25572-201ENSMUST00000157527 172 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm22651-201ENSMUST00000157872 94 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24847-201ENSMUST00000158032 108 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Mir1934-201ENSMUST00000158127 83 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24333-201ENSMUST00000175101 84 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Snord53-201ENSMUST00000175146 78 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm7958-201ENSMUST00000178255 468 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm7950-201ENSMUST00000179633 468 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm27893-201ENSMUST00000184408 194 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm28453-203ENSMUST00000187041 189 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm28992-201ENSMUST00000190534 139 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm37081-201ENSMUST00000192034 196 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm37007-201ENSMUST00000194234 319 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Igkv1-115-201ENSMUST00000198714 302 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm44966-201ENSMUST00000208096 157 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 Mir429-201ENSMUST00000083493 83 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC123052.1-201ENSMUST00000220604 4616 ntBASIC1.89□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25764-201ENSMUST00000104092 134 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm11471-201ENSMUST00000121824 198 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm14389-201ENSMUST00000140453 241 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm8121-201ENSMUST00000153583 499 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm22321-201ENSMUST00000157152 104 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm22380-201ENSMUST00000157479 95 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25653-201ENSMUST00000158473 138 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24510-201ENSMUST00000174965 94 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm27332-201ENSMUST00000184893 112 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm37097-201ENSMUST00000193676 336 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm38019-201ENSMUST00000195133 380 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm42960-201ENSMUST00000202160 241 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm11351-202ENSMUST00000225724 478 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm10025-201ENSMUST00000079568 372 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24147-201ENSMUST00000082763 144 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25930-201ENSMUST00000082785 107 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav13n-2A0A0G2JF93 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Mir499-201ENSMUST00000102357 79 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25875-201ENSMUST00000104323 107 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm26341-201ENSMUST00000104561 134 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm13504-201ENSMUST00000117490 316 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm11285-201ENSMUST00000118443 322 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm14588-201ENSMUST00000119895 172 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25362-201ENSMUST00000158854 105 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25835-201ENSMUST00000158917 144 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm23090-201ENSMUST00000177331 78 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm23003-201ENSMUST00000179948 107 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Snord43-201ENSMUST00000199549 108 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 AC134577.1-201ENSMUST00000227572 295 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25592-201ENSMUST00000082635 131 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24044-201ENSMUST00000083107 156 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm24536-201ENSMUST00000083144 107 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm26493-201ENSMUST00000083155 136 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm10161-201ENSMUST00000091506 204 ntBASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm43300-201ENSMUST00000198540 2043 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm8935-201ENSMUST00000066794 2798 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm12512-201ENSMUST00000119620 217 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm14883-201ENSMUST00000120179 157 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm11388-201ENSMUST00000120908 159 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm22984-201ENSMUST00000122751 122 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm23982-201ENSMUST00000157141 106 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm22883-201ENSMUST00000157376 106 ntBASIC1.86□□□□□ -2.11
Trav13n-2A0A0G2JF93 Gm25491-201ENSMUST00000158733 308 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms