Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC005702.3-201ENST00000585345 1447 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.16□□□□□ -1.26
HPS3Q969F9 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HPS3Q969F9 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HPS3Q969F9 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS3Q969F9 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.15□□□□□ -1.26
HPS3Q969F9 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.15□□□□□ -1.26
HPS3Q969F9 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HPS3Q969F9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.15□□□□□ -1.26
HPS3Q969F9 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
HPS3Q969F9 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HPS3Q969F9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HPS3Q969F9 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HPS3Q969F9 RNU4-39P-201ENST00000362455 127 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 MRPS6P2-201ENST00000381143 370 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 RN7SKP281-201ENST00000410472 352 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.15□□□□□ -1.26
HPS3Q969F9 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HPS3Q969F9 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HPS3Q969F9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AC009237.1-201ENST00000442127 744 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 GAPDHP37-201ENST00000442317 968 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS3Q969F9 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS3Q969F9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 NPM1P9-201ENST00000453156 844 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AC015524.1-201ENST00000491585 472 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AC018645.1-201ENST00000505003 109 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AL133399.1-201ENST00000527476 298 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.15□□□□□ -1.26
HPS3Q969F9 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AC027281.1-201ENST00000574178 758 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AC004805.3-201ENST00000603178 310 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AL049840.6-201ENST00000604583 345 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AL390877.1-201ENST00000605704 214 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 HTR1DP1-201ENST00000616500 888 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
HPS3Q969F9 AC006453.5-201ENST00000636451 619 ntBASIC7.15□□□□□ -1.26
HPS3Q969F9 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.15□□□□□ -1.27
HPS3Q969F9 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
HPS3Q969F9 AC087565.3-202ENST00000642085 1603 ntBASIC7.15□□□□□ -1.27
HPS3Q969F9 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS3Q969F9 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HPS3Q969F9 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.15□□□□□ -1.27
HPS3Q969F9 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.15□□□□□ -1.27
HPS3Q969F9 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.15□□□□□ -1.27
HPS3Q969F9 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.15□□□□□ -1.27
HPS3Q969F9 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS3Q969F9 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS3Q969F9 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS3Q969F9 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS3Q969F9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HPS3Q969F9 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HPS3Q969F9 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HPS3Q969F9 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HPS3Q969F9 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HPS3Q969F9 RNU6-697P-201ENST00000363348 107 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 RNU1-84P-201ENST00000365447 164 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 MRPS21P5-201ENST00000417885 231 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 AL589794.1-201ENST00000424971 390 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.14□□□□□ -1.27
HPS3Q969F9 MED28P4-201ENST00000433137 572 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 AC234771.4-201ENST00000441416 730 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 MTND2P25-201ENST00000449028 610 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS3Q969F9 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.14□□□□□ -1.27
HPS3Q969F9 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.14□□□□□ -1.27
HPS3Q969F9 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS3Q969F9 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 AC106806.2-201ENST00000509365 500 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 AC025768.1-201ENST00000510057 267 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS3Q969F9 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 AC009879.1-201ENST00000520029 839 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS3Q969F9 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS3Q969F9 AC134349.2-201ENST00000535136 910 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms