Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm12042-201ENSMUST00000120479 301 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm12686-201ENSMUST00000120546 397 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm24922-201ENSMUST00000158511 102 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm24799-201ENSMUST00000178431 79 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Mir6481-201ENSMUST00000184617 110 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm28744-201ENSMUST00000189939 340 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm15235-201ENSMUST00000200572 194 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Vps53Q8CCB4 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Mir542-201ENSMUST00000102186 85 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm25875-201ENSMUST00000104323 107 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm16171-201ENSMUST00000118004 324 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm14020-201ENSMUST00000118165 662 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 DQ267100-201ENSMUST00000122600 72 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm22664-201ENSMUST00000158719 105 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm28849-201ENSMUST00000188127 174 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm28330-201ENSMUST00000190353 171 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm43978-201ENSMUST00000203491 451 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Gm23727-201ENSMUST00000083352 164 ntBASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Vps53Q8CCB4 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm13714-201ENSMUST00000117313 221 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm12934-201ENSMUST00000119221 343 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm12771-201ENSMUST00000120246 135 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm26479-201ENSMUST00000122620 106 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm23331-201ENSMUST00000157423 108 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Snord53-201ENSMUST00000175146 78 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm25749-201ENSMUST00000175485 111 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm20660-201ENSMUST00000177515 289 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Mir7013-201ENSMUST00000183540 72 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm27330-201ENSMUST00000184689 132 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm28848-201ENSMUST00000189984 168 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm6801-201ENSMUST00000190697 339 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm44337-201ENSMUST00000196553 114 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.12□□□□□ -1.91
Vps53Q8CCB4 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm23453-201ENSMUST00000083326 106 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Mir137-201ENSMUST00000083635 73 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Gm23731-201ENSMUST00000083749 107 ntBASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Vps53Q8CCB4 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm25945-201ENSMUST00000122484 135 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm8292-201ENSMUST00000162574 396 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm20630-201ENSMUST00000177387 551 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm24308-201ENSMUST00000177773 114 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm27786-201ENSMUST00000184337 70 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm28825-201ENSMUST00000186233 238 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm29140-201ENSMUST00000190187 476 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm24152-201ENSMUST00000082764 163 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.11□□□□□ -1.91
Vps53Q8CCB4 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm25485-201ENSMUST00000104120 132 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm22658-201ENSMUST00000104196 155 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm15002-201ENSMUST00000118406 452 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm26186-201ENSMUST00000157689 125 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm20718-201ENSMUST00000176058 259 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm26200-201ENSMUST00000180273 79 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Mir7242-201ENSMUST00000183710 79 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm37923-201ENSMUST00000191624 161 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm37746-201ENSMUST00000193249 198 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm43680-201ENSMUST00000199466 340 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm45687-201ENSMUST00000209454 155 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm5899-201ENSMUST00000071770 270 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Gm25401-201ENSMUST00000082975 106 ntBASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Vps53Q8CCB4 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm14894-201ENSMUST00000117170 270 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm13432-201ENSMUST00000118861 241 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm25392-201ENSMUST00000157335 297 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm24726-201ENSMUST00000158232 121 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Mir5118-201ENSMUST00000175551 67 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm28900-201ENSMUST00000185232 156 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm37449-201ENSMUST00000193016 270 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm18658-201ENSMUST00000195558 270 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Gm44524-201ENSMUST00000203899 271 ntBASIC3.09□□□□□ -1.91
Vps53Q8CCB4 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms