Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37449-201ENSMUST00000193016 270 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm18658-201ENSMUST00000195558 270 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trim28Q62318 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm45907-201ENSMUST00000213023 193 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim28Q62318 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm26456-201ENSMUST00000082831 111 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm23264-201ENSMUST00000083372 107 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim28Q62318 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim28Q62318 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim28Q62318 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim28Q62318 Gm22936-201ENSMUST00000103955 126 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm24670-201ENSMUST00000104154 132 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm24274-201ENSMUST00000116787 124 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm15760-201ENSMUST00000119553 283 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm11456-201ENSMUST00000121070 256 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm23886-201ENSMUST00000122684 313 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm24006-201ENSMUST00000158462 132 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm24084-201ENSMUST00000175173 137 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm21827-201ENSMUST00000178247 423 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Mir7062-201ENSMUST00000185038 66 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Gm28650-201ENSMUST00000188413 411 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim28Q62318 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim28Q62318 Gm44519-201ENSMUST00000206486 122 ntBASIC3.48□□□□□ -1.85
Trim28Q62318 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim28Q62318 Mir682-201ENSMUST00000102281 96 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim28Q62318 Gm24132-201ENSMUST00000104745 91 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Gm13541-201ENSMUST00000119519 283 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.47□□□□□ -1.85
Trim28Q62318 Gm7582-201ENSMUST00000160831 603 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Gm28849-201ENSMUST00000188127 174 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Gm28330-201ENSMUST00000190353 171 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Gm37763-201ENSMUST00000193445 120 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim28Q62318 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Gm10212-201ENSMUST00000087884 324 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim28Q62318 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim28Q62318 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Trim28Q62318 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.47□□□□□ -1.85
Trim28Q62318 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Trim28Q62318 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
Trim28Q62318 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim28Q62318 Gm23472-201ENSMUST00000101806 191 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm24671-201ENSMUST00000104159 158 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm23184-201ENSMUST00000122594 131 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm24005-201ENSMUST00000158459 296 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm23409-201ENSMUST00000158516 237 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm22118-201ENSMUST00000175593 171 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm24497-201ENSMUST00000177868 191 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm28900-201ENSMUST00000185232 156 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm43427-201ENSMUST00000198188 331 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.46□□□□□ -1.86
Trim28Q62318 Gm25813-201ENSMUST00000082748 191 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm25930-201ENSMUST00000082785 107 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm25204-201ENSMUST00000082843 106 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm23444-201ENSMUST00000082922 191 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Gm26066-201ENSMUST00000083385 109 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim28Q62318 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.46□□□□□ -1.86
Trim28Q62318 Snord14c-201ENSMUST00000101927 86 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Mir466p-201ENSMUST00000103925 89 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm25054-201ENSMUST00000157370 97 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm25637-201ENSMUST00000157529 107 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm23584-201ENSMUST00000157655 129 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm20450-201ENSMUST00000173652 147 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Mir5129-201ENSMUST00000174938 78 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm6615-201ENSMUST00000199426 631 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm44520-201ENSMUST00000205447 802 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm44657-201ENSMUST00000208568 450 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm24705-201ENSMUST00000082808 107 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Snord82-201ENSMUST00000082889 70 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim28Q62318 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.45□□□□□ -1.86
Trim28Q62318 Gm15936-201ENSMUST00000118706 460 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm11819-201ENSMUST00000122192 372 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.44□□□□□ -1.86
Trim28Q62318 Gm16354-201ENSMUST00000155376 150 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm26277-201ENSMUST00000157097 152 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm22537-201ENSMUST00000158172 199 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm24552-201ENSMUST00000158646 103 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Snord53-201ENSMUST00000175146 78 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm18341-201ENSMUST00000197538 622 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm19563-201ENSMUST00000222031 270 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms