Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm24163-201ENSMUST00000093660 132 ntBASIC3.78□□□□□ -1.8
Trim56Q80VI1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim56Q80VI1 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm23536-201ENSMUST00000157541 134 ntBASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm23277-201ENSMUST00000157914 136 ntBASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm20672-201ENSMUST00000176605 261 ntBASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm17522-201ENSMUST00000178144 498 ntBASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm23860-201ENSMUST00000179446 132 ntBASIC3.77□□□□□ -1.81
Trim56Q80VI1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm37104-201ENSMUST00000193278 196 ntBASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim56Q80VI1 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Trim56Q80VI1 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim56Q80VI1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim56Q80VI1 Gm14748-201ENSMUST00000119819 411 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 Gm22956-201ENSMUST00000122520 80 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim56Q80VI1 Gm25424-201ENSMUST00000157612 58 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim56Q80VI1 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 Mir7062-201ENSMUST00000185038 66 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.76□□□□□ -1.81
Trim56Q80VI1 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim56Q80VI1 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm26477-201ENSMUST00000122617 323 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm14389-201ENSMUST00000140453 241 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm27396-201ENSMUST00000157708 58 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm24131-201ENSMUST00000158539 107 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 Mir5136-201ENSMUST00000175573 76 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm25856-201ENSMUST00000082786 75 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.75□□□□□ -1.81
Trim56Q80VI1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim56Q80VI1 Gm25985-201ENSMUST00000122677 107 ntBASIC3.74□□□□□ -1.81
Trim56Q80VI1 Gm24601-201ENSMUST00000157970 143 ntBASIC3.74□□□□□ -1.81
Trim56Q80VI1 Gm23850-201ENSMUST00000083830 169 ntBASIC3.74□□□□□ -1.81
Trim56Q80VI1 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim56Q80VI1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim56Q80VI1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim56Q80VI1 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim56Q80VI1 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm24582-201ENSMUST00000103967 103 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm24376-201ENSMUST00000104399 127 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm22497-201ENSMUST00000104499 131 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm13797-201ENSMUST00000121792 120 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm25716-201ENSMUST00000158628 104 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm27470-201ENSMUST00000184070 210 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm43217-201ENSMUST00000199513 367 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm45687-201ENSMUST00000209454 155 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm22978-201ENSMUST00000082607 160 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Gm22970-201ENSMUST00000083304 186 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.73□□□□□ -1.81
Trim56Q80VI1 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Trim56Q80VI1 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Trim56Q80VI1 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim56Q80VI1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim56Q80VI1 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim56Q80VI1 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm24263-201ENSMUST00000104059 107 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm25321-201ENSMUST00000122558 102 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm23476-201ENSMUST00000158881 274 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Trbv18-201ENSMUST00000194256 294 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm37290-201ENSMUST00000195775 339 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Mir3068-202ENSMUST00000197755 79 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm9370-201ENSMUST00000222787 609 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm22507-201ENSMUST00000082773 160 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm10813-201ENSMUST00000099936 90 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.72□□□□□ -1.81
Trim56Q80VI1 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim56Q80VI1 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms