Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc27Q3V036 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm25875-201ENSMUST00000104323 107 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm23175-201ENSMUST00000104371 132 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm22486-201ENSMUST00000116815 137 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm12646-201ENSMUST00000119144 238 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm13992-201ENSMUST00000120558 156 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm16533-201ENSMUST00000140035 228 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm25490-201ENSMUST00000158734 130 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm28921-201ENSMUST00000190219 378 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm24152-201ENSMUST00000082764 163 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm25930-201ENSMUST00000082785 107 ntBASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc27Q3V036 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Gm23599-201ENSMUST00000157261 251 ntBASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Gm25333-201ENSMUST00000158035 246 ntBASIC3.57□□□□□ -1.84
Ccdc27Q3V036 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc27Q3V036 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Mir1b-201ENSMUST00000117012 122 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm14803-201ENSMUST00000117163 361 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm13504-201ENSMUST00000117490 316 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm26479-201ENSMUST00000122620 106 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm26027-201ENSMUST00000122725 268 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm22984-201ENSMUST00000122751 122 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm25805-201ENSMUST00000122788 108 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Mir6336-201ENSMUST00000183581 130 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm44600-201ENSMUST00000208540 111 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm46997-201ENSMUST00000222108 217 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm22358-201ENSMUST00000082877 122 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Gm25188-201ENSMUST00000083913 122 ntBASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc27Q3V036 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Ccdc27Q3V036 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Gm25066-201ENSMUST00000158145 123 ntBASIC3.55□□□□□ -1.84
Ccdc27Q3V036 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Gm27694-201ENSMUST00000184740 86 ntBASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.55□□□□□ -1.84
Ccdc27Q3V036 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.55□□□□□ -1.84
Ccdc27Q3V036 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Gm4945-201ENSMUST00000075152 453 ntBASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Ccdc27Q3V036 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm22939-201ENSMUST00000103958 131 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm23588-201ENSMUST00000157659 99 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm26186-201ENSMUST00000157689 125 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm22382-201ENSMUST00000158185 130 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm44399-201ENSMUST00000205043 226 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm45859-201ENSMUST00000212794 214 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm25410-201ENSMUST00000083758 137 ntBASIC3.54□□□□□ -1.84
Ccdc27Q3V036 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm15846-201ENSMUST00000116022 320 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm25316-201ENSMUST00000116826 118 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm12155-201ENSMUST00000121267 160 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Snord53-201ENSMUST00000175146 78 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Mir6399-201ENSMUST00000184050 84 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm29005-201ENSMUST00000186773 320 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm43901-201ENSMUST00000203247 453 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm44977-201ENSMUST00000205283 420 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm9795-201ENSMUST00000062156 693 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.53□□□□□ -1.84
Ccdc27Q3V036 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc27Q3V036 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.52□□□□□ -1.85
Ccdc27Q3V036 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc27Q3V036 Gm26249-201ENSMUST00000116708 118 ntBASIC3.52□□□□□ -1.85
Ccdc27Q3V036 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.52□□□□□ -1.85
Ccdc27Q3V036 Gm24415-201ENSMUST00000180218 107 ntBASIC3.52□□□□□ -1.85
Ccdc27Q3V036 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.52□□□□□ -1.85
Ccdc27Q3V036 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc27Q3V036 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc27Q3V036 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc27Q3V036 Gm15497-201ENSMUST00000119137 551 ntBASIC3.51□□□□□ -1.85
Ccdc27Q3V036 Gm5396-201ENSMUST00000121222 532 ntBASIC3.51□□□□□ -1.85
Ccdc27Q3V036 Gm25664-201ENSMUST00000157697 107 ntBASIC3.51□□□□□ -1.85
Ccdc27Q3V036 Gm20660-201ENSMUST00000177515 289 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms