Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.24□□□□□ -1.89
Vps53Q8CCB4 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Gm44010-201ENSMUST00000204432 331 ntBASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Gm9377-201ENSMUST00000207227 623 ntBASIC3.24□□□□□ -1.89
Vps53Q8CCB4 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Gm22685-201ENSMUST00000082848 106 ntBASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Gm25896-201ENSMUST00000083713 136 ntBASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Vps53Q8CCB4 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Vps53Q8CCB4 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Snord14c-201ENSMUST00000101927 86 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm22782-201ENSMUST00000104082 132 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm24079-201ENSMUST00000104352 132 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm15215-201ENSMUST00000117773 489 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm15272-201ENSMUST00000120865 233 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm12815-201ENSMUST00000121737 135 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm24629-201ENSMUST00000122762 89 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm7582-201ENSMUST00000160831 603 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Mir6371-201ENSMUST00000184470 111 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm38060-201ENSMUST00000194822 464 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm34314-201ENSMUST00000203622 367 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.23□□□□□ -1.89
Vps53Q8CCB4 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm13355-201ENSMUST00000117996 317 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm15211-201ENSMUST00000118932 528 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm13541-201ENSMUST00000119519 283 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm25153-201ENSMUST00000157118 156 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm23713-201ENSMUST00000157353 70 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm22615-201ENSMUST00000158102 70 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm24084-201ENSMUST00000175173 137 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Snord93-201ENSMUST00000175580 71 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Snora15-201ENSMUST00000177461 131 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm23355-201ENSMUST00000177614 107 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm23148-201ENSMUST00000180367 107 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm37281-201ENSMUST00000192412 439 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm2077-201ENSMUST00000195017 319 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm25258-201ENSMUST00000083049 107 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Mir208a-201ENSMUST00000083498 83 ntBASIC3.22□□□□□ -1.89
Vps53Q8CCB4 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Vps53Q8CCB4 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.21□□□□□ -1.89
Vps53Q8CCB4 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Vps53Q8CCB4 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm24282-201ENSMUST00000104232 66 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm12617-201ENSMUST00000121268 381 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm23963-201ENSMUST00000179603 77 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm37713-201ENSMUST00000191746 198 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm45452-201ENSMUST00000210905 177 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.21□□□□□ -1.9
Vps53Q8CCB4 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm22620-201ENSMUST00000082700 133 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Gm25856-201ENSMUST00000082786 75 ntBASIC3.21□□□□□ -1.9
Vps53Q8CCB4 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm24122-201ENSMUST00000104107 132 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm11572-201ENSMUST00000119164 120 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm13729-201ENSMUST00000120328 406 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm25280-201ENSMUST00000157269 101 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm23895-201ENSMUST00000158108 160 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm22447-201ENSMUST00000158155 92 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm23258-201ENSMUST00000158319 106 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm24681-201ENSMUST00000158760 107 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm24816-201ENSMUST00000175311 151 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm25528-201ENSMUST00000180264 132 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Mir3535-201ENSMUST00000197651 147 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Vps53Q8CCB4 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm46997-201ENSMUST00000222108 217 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm9174-201ENSMUST00000078149 255 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm22358-201ENSMUST00000082877 122 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Gm25188-201ENSMUST00000083913 122 ntBASIC3.2□□□□□ -1.9
Vps53Q8CCB4 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms