Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm38255-201ENSMUST00000194910 2996 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm12443-201ENSMUST00000122308 323 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm23080-201ENSMUST00000157846 103 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm27580-201ENSMUST00000183666 149 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Mir6399-201ENSMUST00000184050 84 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm27445-201ENSMUST00000184484 72 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm37239-201ENSMUST00000193510 141 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm34779-201ENSMUST00000210036 263 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm45317-201ENSMUST00000210385 223 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim47Q8C0E3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Trim47Q8C0E3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm13831-201ENSMUST00000118764 302 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm12335-201ENSMUST00000119738 327 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm23753-201ENSMUST00000157575 149 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm24747-201ENSMUST00000157835 87 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm26160-201ENSMUST00000158965 63 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm24086-201ENSMUST00000175171 98 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm27668-201ENSMUST00000184188 120 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm42834-201ENSMUST00000196845 256 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm24626-201ENSMUST00000082621 161 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim47Q8C0E3 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm23230-201ENSMUST00000157298 133 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm23860-201ENSMUST00000179446 132 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm28825-201ENSMUST00000186233 238 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm37281-201ENSMUST00000192412 439 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 AC124400.1-201ENSMUST00000225779 193 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Gm22868-201ENSMUST00000083955 164 ntBASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim47Q8C0E3 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm14816-201ENSMUST00000117174 294 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm11644-201ENSMUST00000119735 150 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm22586-201ENSMUST00000157507 122 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm23101-201ENSMUST00000157550 137 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm23504-201ENSMUST00000158988 95 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm20693-201ENSMUST00000177431 211 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm27392-201ENSMUST00000185041 101 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm29452-201ENSMUST00000187996 313 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm18546-201ENSMUST00000197245 676 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm43381-201ENSMUST00000198553 165 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 AC147101.2-201ENSMUST00000219756 184 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim47Q8C0E3 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim47Q8C0E3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Trim47Q8C0E3 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim47Q8C0E3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm25764-201ENSMUST00000104092 134 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm25727-201ENSMUST00000104522 131 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms