Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm22674-201ENSMUST00000104413 131 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm16171-201ENSMUST00000118004 324 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm12956-201ENSMUST00000122184 414 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm22560-201ENSMUST00000157332 120 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm23713-201ENSMUST00000157353 70 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm22615-201ENSMUST00000158102 70 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm23476-201ENSMUST00000158881 274 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm23921-201ENSMUST00000175258 107 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm20660-201ENSMUST00000177515 289 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm22308-201ENSMUST00000177609 107 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm23047-201ENSMUST00000177661 94 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm22997-201ENSMUST00000082845 107 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm23451-201ENSMUST00000083328 122 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Mir137-201ENSMUST00000083635 73 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Gm23845-201ENSMUST00000083834 152 ntBASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Ssbp4Q3U4B1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Mir466k-201ENSMUST00000116774 122 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm15714-201ENSMUST00000117168 250 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm13378-201ENSMUST00000117483 336 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm12617-201ENSMUST00000121268 381 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm22814-201ENSMUST00000157452 104 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm23588-201ENSMUST00000157659 99 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm23641-201ENSMUST00000157857 101 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm24922-201ENSMUST00000158511 102 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm24681-201ENSMUST00000158760 107 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm16111-201ENSMUST00000162128 285 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm6788-201ENSMUST00000166459 270 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm24816-201ENSMUST00000175311 151 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Mir6353-201ENSMUST00000183596 113 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm27521-201ENSMUST00000184022 64 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm37162-201ENSMUST00000191708 551 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm45288-201ENSMUST00000210236 151 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Gm2829-201ENSMUST00000213121 499 ntBASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ssbp4Q3U4B1 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm25943-201ENSMUST00000103791 90 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Mir466b-7-201ENSMUST00000103804 88 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Mir466b-5-201ENSMUST00000103900 88 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm24122-201ENSMUST00000104107 132 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm11936-201ENSMUST00000118323 160 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm15213-201ENSMUST00000122098 216 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm24475-201ENSMUST00000157435 143 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm25362-201ENSMUST00000158854 105 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm22500-201ENSMUST00000158982 99 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Snord53-201ENSMUST00000175146 78 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Mir466b-4-201ENSMUST00000178801 90 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm25285-201ENSMUST00000178951 90 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm6660-201ENSMUST00000179149 468 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Mir466b-6-201ENSMUST00000180061 90 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Mir466c-2-201ENSMUST00000180211 90 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm27869-201ENSMUST00000184327 122 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm27997-201ENSMUST00000184942 69 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm18357-201ENSMUST00000188184 580 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm28169-201ENSMUST00000190342 345 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm37801-201ENSMUST00000194754 274 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm43600-201ENSMUST00000202134 223 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm44960-201ENSMUST00000207403 141 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm24316-201ENSMUST00000083041 107 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Snord14d-201ENSMUST00000083424 86 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm22154-201ENSMUST00000083844 131 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.22□□□□□ -2.05
Ssbp4Q3U4B1 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm13355-201ENSMUST00000117996 317 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm3788-201ENSMUST00000119949 136 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm6574-201ENSMUST00000120037 362 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm24630-201ENSMUST00000122768 106 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm25184-201ENSMUST00000157753 163 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm24858-201ENSMUST00000158058 323 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm23895-201ENSMUST00000158108 160 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm25718-201ENSMUST00000158632 118 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Gm7582-201ENSMUST00000160831 603 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.21□□□□□ -2.06
Ssbp4Q3U4B1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms