Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm24172-201ENSMUST00000104127 117 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm15846-201ENSMUST00000116022 320 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm25783-201ENSMUST00000122525 190 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm12238-201ENSMUST00000127764 124 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm23956-201ENSMUST00000157211 119 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm25720-201ENSMUST00000157503 105 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm25384-201ENSMUST00000157807 105 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm22187-201ENSMUST00000157819 129 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm22118-201ENSMUST00000175593 171 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm22308-201ENSMUST00000177609 107 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm27532-201ENSMUST00000183726 113 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm44966-201ENSMUST00000208096 157 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.76□□□□□ -1.97
Col28a1Q2UY11 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm22784-201ENSMUST00000104088 132 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm25879-201ENSMUST00000104330 107 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm11693-201ENSMUST00000119625 565 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm14770-201ENSMUST00000122197 312 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm16218-201ENSMUST00000155424 388 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm23325-201ENSMUST00000157422 129 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm25220-201ENSMUST00000157546 95 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm28020-201ENSMUST00000157739 67 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm22011-201ENSMUST00000158790 123 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm25834-201ENSMUST00000158916 101 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm17100-201ENSMUST00000168963 272 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Mir3103-201ENSMUST00000175474 67 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm20651-201ENSMUST00000177219 329 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm26297-201ENSMUST00000179464 132 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Gm43402-201ENSMUST00000197159 159 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Col28a1Q2UY11 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm13343-201ENSMUST00000116474 105 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm6897-201ENSMUST00000117714 138 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm14758-201ENSMUST00000119104 138 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm14551-201ENSMUST00000120802 256 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm23887-201ENSMUST00000122683 172 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm22561-201ENSMUST00000157331 84 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm25392-201ENSMUST00000157335 297 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm24691-201ENSMUST00000157762 140 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm22654-201ENSMUST00000157874 105 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm22766-201ENSMUST00000158372 99 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm25162-201ENSMUST00000158906 159 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm22858-201ENSMUST00000174972 76 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Mir6338-201ENSMUST00000183389 109 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm18015-201ENSMUST00000214879 316 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm22806-201ENSMUST00000082738 136 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm23847-201ENSMUST00000083829 110 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm22353-201ENSMUST00000083918 136 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.74□□□□□ -1.97
Col28a1Q2UY11 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Gm25915-201ENSMUST00000104265 126 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Gm22447-201ENSMUST00000158155 92 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Snord53-201ENSMUST00000175146 78 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Gm19257-201ENSMUST00000186121 183 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms