Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir6370-201ENSMUST00000183510 120 ntBASIC3.7□□□□□ -1.82
Sox1P53783 Gm28344-201ENSMUST00000185704 279 ntBASIC3.7□□□□□ -1.82
Sox1P53783 Gm29005-201ENSMUST00000186773 320 ntBASIC3.7□□□□□ -1.82
Sox1P53783 Gm43199-201ENSMUST00000200019 307 ntBASIC3.7□□□□□ -1.82
Sox1P53783 Gm44399-201ENSMUST00000205043 226 ntBASIC3.7□□□□□ -1.82
Sox1P53783 Gm44521-201ENSMUST00000206469 217 ntBASIC3.7□□□□□ -1.82
Sox1P53783 Gm25815-201ENSMUST00000082755 107 ntBASIC3.7□□□□□ -1.82
Sox1P53783 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sox1P53783 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox1P53783 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sox1P53783 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Sox1P53783 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sox1P53783 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sox1P53783 Gm14586-201ENSMUST00000119571 408 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm12926-201ENSMUST00000121158 409 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.69□□□□□ -1.82
Sox1P53783 Gm22560-201ENSMUST00000157332 120 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm23123-201ENSMUST00000157648 144 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm24691-201ENSMUST00000157762 140 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm26215-201ENSMUST00000158584 139 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm17117-201ENSMUST00000163665 299 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm44352-201ENSMUST00000196358 110 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm33866-201ENSMUST00000196911 289 ntBASIC3.69□□□□□ -1.82
Sox1P53783 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.69□□□□□ -1.82
Sox1P53783 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.69□□□□□ -1.82
Sox1P53783 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sox1P53783 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Sox1P53783 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sox1P53783 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.69□□□□□ -1.82
Sox1P53783 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.69□□□□□ -1.82
Sox1P53783 Gm24276-201ENSMUST00000102181 110 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm24067-201ENSMUST00000104514 85 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm15282-201ENSMUST00000117707 300 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm13167-201ENSMUST00000118554 578 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm13687-201ENSMUST00000119857 282 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm24898-201ENSMUST00000158133 106 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.68□□□□□ -1.82
Sox1P53783 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.68□□□□□ -1.82
Sox1P53783 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.68□□□□□ -1.82
Sox1P53783 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm24616-201ENSMUST00000083274 139 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm24453-201ENSMUST00000083346 76 ntBASIC3.68□□□□□ -1.82
Sox1P53783 Gm23727-201ENSMUST00000083352 164 ntBASIC3.68□□□□□ -1.82
Sox1P53783 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.68□□□□□ -1.82
Sox1P53783 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sox1P53783 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sox1P53783 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Sox1P53783 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Sox1P53783 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Sox1P53783 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Sox1P53783 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Sox1P53783 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sox1P53783 Gm24582-201ENSMUST00000103967 103 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Gm25938-201ENSMUST00000104139 166 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Gm13761-201ENSMUST00000117238 807 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sox1P53783 Gm23044-201ENSMUST00000157891 100 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Gm24958-201ENSMUST00000158009 97 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Gm22516-201ENSMUST00000158266 124 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Gm24666-201ENSMUST00000158937 167 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.67□□□□□ -1.82
Sox1P53783 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Gm22978-201ENSMUST00000082607 160 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Gm22299-201ENSMUST00000082663 136 ntBASIC3.67□□□□□ -1.82
Sox1P53783 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sox1P53783 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Sox1P53783 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Sox1P53783 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sox1P53783 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox1P53783 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox1P53783 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox1P53783 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sox1P53783 Gm23322-201ENSMUST00000104464 167 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm14811-201ENSMUST00000117070 117 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm14518-201ENSMUST00000117351 542 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm12449-201ENSMUST00000117572 234 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sox1P53783 Gm25961-201ENSMUST00000157174 135 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm26100-201ENSMUST00000157245 127 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm27783-201ENSMUST00000183534 105 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Mir8116-201ENSMUST00000184134 97 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm29603-201ENSMUST00000186792 334 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm19244-201ENSMUST00000204340 253 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm19366-201ENSMUST00000206996 156 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm45116-201ENSMUST00000207392 275 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm22443-201ENSMUST00000082890 107 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm25789-201ENSMUST00000083294 76 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Mir137-201ENSMUST00000083635 73 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Snord15a-201ENSMUST00000083888 148 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox1P53783 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sox1P53783 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.66□□□□□ -1.82
Sox1P53783 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.66□□□□□ -1.82
Sox1P53783 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox1P53783 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sox1P53783 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms