Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm32300-201ENSMUST00000221735 515 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm22683-201ENSMUST00000082854 137 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Cdx1P18111 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.31□□□□□ -2.2
Cdx1P18111 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.31□□□□□ -2.2
Cdx1P18111 Gm13804-201ENSMUST00000119552 172 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm22559-201ENSMUST00000157329 134 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm25423-201ENSMUST00000157609 107 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm22537-201ENSMUST00000158172 199 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm23090-201ENSMUST00000177331 78 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.31□□□□□ -2.2
Cdx1P18111 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Cdx1P18111 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm37438-201ENSMUST00000192813 393 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm37599-201ENSMUST00000193067 489 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm45907-201ENSMUST00000213023 193 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.31□□□□□ -2.2
Cdx1P18111 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Cdx1P18111 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.31□□□□□ -2.2
Cdx1P18111 Gm23060-201ENSMUST00000102345 109 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm25832-201ENSMUST00000104140 130 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm22149-201ENSMUST00000104442 136 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm12417-201ENSMUST00000119153 403 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm12806-201ENSMUST00000119384 268 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm25269-201ENSMUST00000122601 104 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm22221-201ENSMUST00000157362 103 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm25371-201ENSMUST00000158162 101 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm24551-201ENSMUST00000158645 92 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Cdx1P18111 Gm28995-201ENSMUST00000186625 261 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Mir1291-201ENSMUST00000199842 117 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm44336-201ENSMUST00000203696 468 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm44923-201ENSMUST00000206673 85 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm45375-201ENSMUST00000210338 280 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Snora34-201ENSMUST00000083402 138 ntBASIC1.3□□□□□ -2.2
Cdx1P18111 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Cdx1P18111 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
Cdx1P18111 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Cdx1P18111 Gm26377-201ENSMUST00000102184 108 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm14793-201ENSMUST00000118739 311 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.29□□□□□ -2.2
Cdx1P18111 Gm12639-201ENSMUST00000121400 493 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm14972-201ENSMUST00000121780 364 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm14366-201ENSMUST00000121970 730 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm24915-201ENSMUST00000157288 78 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm22963-201ENSMUST00000157960 91 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm23317-201ENSMUST00000157999 129 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm22316-201ENSMUST00000158012 216 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm23854-201ENSMUST00000158378 108 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Cdx1P18111 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Cdx1P18111 Gm28912-201ENSMUST00000189001 234 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm9156-201ENSMUST00000189660 463 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.29□□□□□ -2.2
Cdx1P18111 Gm37054-201ENSMUST00000193481 543 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.29□□□□□ -2.2
Cdx1P18111 Gm24977-201ENSMUST00000083106 163 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm23245-201ENSMUST00000083370 135 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.29□□□□□ -2.2
Cdx1P18111 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Cdx1P18111 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Cdx1P18111 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Cdx1P18111 Gm22761-201ENSMUST00000102278 96 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
Cdx1P18111 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Gm22027-201ENSMUST00000122737 127 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Gm23025-201ENSMUST00000158769 111 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.28□□□□□ -2.2
Cdx1P18111 Gm17906-201ENSMUST00000202480 901 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Gm18854-201ENSMUST00000211196 329 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.28□□□□□ -2.2
Cdx1P18111 Gm2628-201ENSMUST00000218019 426 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Snora3-201ENSMUST00000083082 132 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Mir221-201ENSMUST00000083488 95 ntBASIC1.28□□□□□ -2.2
Cdx1P18111 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Cdx1P18111 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Cdx1P18111 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Cdx1P18111 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Mir374b-201ENSMUST00000102314 95 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cdx1P18111 Gm24379-201ENSMUST00000122695 86 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 418.6 ms