Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPL10P7-201ENST00000495649 625 ntBASIC6.86□□□□□ -1.31
TPM1P09493 AC010409.2-201ENST00000505780 478 ntBASIC6.86□□□□□ -1.31
TPM1P09493 AC114940.1-201ENST00000512162 1265 ntBASIC6.86□□□□□ -1.31
TPM1P09493 CYP4F27P-201ENST00000514557 494 ntBASIC6.86□□□□□ -1.31
TPM1P09493 RN7SKP196-201ENST00000516267 345 ntBASIC6.86□□□□□ -1.31
TPM1P09493 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM1P09493 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM1P09493 AC009283.1-201ENST00000615852 645 ntBASIC6.86□□□□□ -1.31
TPM1P09493 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM1P09493 AC027559.1-201ENST00000636288 271 ntBASIC6.86□□□□□ -1.31
TPM1P09493 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM1P09493 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.86□□□□□ -1.31
TPM1P09493 AC022164.1-201ENST00000568767 2673 ntBASIC6.86□□□□□ -1.31
TPM1P09493 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM1P09493 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
TPM1P09493 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.86□□□□□ -1.31
TPM1P09493 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM1P09493 AP001541.1-201ENST00000623322 1904 ntBASIC6.86□□□□□ -1.31
TPM1P09493 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TPM1P09493 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
TPM1P09493 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM1P09493 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 AC010132.4-201ENST00000569883 1368 ntBASIC6.85□□□□□ -1.31
TPM1P09493 AC093671.1-201ENST00000624981 2929 ntBASIC6.85□□□□□ -1.31
TPM1P09493 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM1P09493 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.85□□□□□ -1.31
TPM1P09493 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 AC015977.1-201ENST00000418887 292 ntBASIC6.85□□□□□ -1.31
TPM1P09493 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.85□□□□□ -1.31
TPM1P09493 AL365220.1-201ENST00000432923 399 ntBASIC6.85□□□□□ -1.31
TPM1P09493 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.85□□□□□ -1.31
TPM1P09493 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.85□□□□□ -1.31
TPM1P09493 RAB28P2-201ENST00000454299 641 ntBASIC6.85□□□□□ -1.31
TPM1P09493 AC112187.1-201ENST00000455837 479 ntBASIC6.85□□□□□ -1.31
TPM1P09493 Z83838.1-202ENST00000456225 839 ntBASIC6.85□□□□□ -1.31
TPM1P09493 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.85□□□□□ -1.31
TPM1P09493 RN7SL714P-201ENST00000487050 298 ntBASIC6.85□□□□□ -1.31
TPM1P09493 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.85□□□□□ -1.31
TPM1P09493 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM1P09493 AC136777.2-201ENST00000522979 358 ntBASIC6.85□□□□□ -1.31
TPM1P09493 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.85□□□□□ -1.31
TPM1P09493 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.85□□□□□ -1.31
TPM1P09493 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.85□□□□□ -1.31
TPM1P09493 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.85□□□□□ -1.31
TPM1P09493 RN7SL426P-201ENST00000579106 295 ntBASIC6.85□□□□□ -1.31
TPM1P09493 NPIPB1P-202ENST00000588786 828 ntBASIC6.85□□□□□ -1.31
TPM1P09493 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.85□□□□□ -1.31
TPM1P09493 uc_338.33-201ENST00000614988 170 ntBASIC6.85□□□□□ -1.31
TPM1P09493 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.85□□□□□ -1.31
TPM1P09493 RAB28P4-201ENST00000622233 665 ntBASIC6.85□□□□□ -1.31
TPM1P09493 AC005514.1-201ENST00000623521 208 ntBASIC6.85□□□□□ -1.31
TPM1P09493 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM1P09493 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
TPM1P09493 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
TPM1P09493 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM1P09493 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM1P09493 HSPD1P1-201ENST00000503199 1726 ntBASIC6.84□□□□□ -1.31
TPM1P09493 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM1P09493 HDAC1P2-201ENST00000453661 1398 ntBASIC6.84□□□□□ -1.31
TPM1P09493 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM1P09493 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM1P09493 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TPM1P09493 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
TPM1P09493 RNA5SP140-201ENST00000364524 92 ntBASIC6.84□□□□□ -1.31
TPM1P09493 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM1P09493 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
TPM1P09493 AL445238.1-204ENST00000400311 463 ntBASIC6.84□□□□□ -1.31
TPM1P09493 MICG-208ENST00000416822 132 ntBASIC6.84□□□□□ -1.31
TPM1P09493 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM1P09493 YWHAZP5-201ENST00000419975 730 ntBASIC6.84□□□□□ -1.31
TPM1P09493 VN1R53P-201ENST00000429536 957 ntBASIC6.84□□□□□ -1.31
TPM1P09493 MED28P4-201ENST00000433137 572 ntBASIC6.84□□□□□ -1.31
TPM1P09493 OR52U1P-201ENST00000439752 923 ntBASIC6.84□□□□□ -1.31
TPM1P09493 RANP2-201ENST00000456833 229 ntBASIC6.84□□□□□ -1.31
TPM1P09493 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM1P09493 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM1P09493 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.84□□□□□ -1.31
TPM1P09493 NPM1P42-201ENST00000560329 862 ntBASIC6.84□□□□□ -1.31
TPM1P09493 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.84□□□□□ -1.31
TPM1P09493 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.84□□□□□ -1.31
TPM1P09493 AC010287.1-201ENST00000566916 357 ntBASIC6.84□□□□□ -1.31
TPM1P09493 SYPL1P2-201ENST00000582878 727 ntBASIC6.84□□□□□ -1.31
TPM1P09493 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM1P09493 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM1P09493 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM1P09493 AP001357.1-201ENST00000586304 1053 ntBASIC6.84□□□□□ -1.31
TPM1P09493 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM1P09493 AC004805.3-201ENST00000603178 310 ntBASIC6.84□□□□□ -1.31
TPM1P09493 AL583832.1-201ENST00000603227 784 ntBASIC6.84□□□□□ -1.31
TPM1P09493 AC004890.3-201ENST00000605566 1095 ntBASIC6.84□□□□□ -1.31
TPM1P09493 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM1P09493 AL109924.4-201ENST00000623089 670 ntBASIC6.84□□□□□ -1.31
TPM1P09493 LINC02495-203ENST00000636704 242 ntBASIC6.84□□□□□ -1.31
TPM1P09493 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms