Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm23472-201ENSMUST00000101806 191 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm13992-201ENSMUST00000120558 156 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm26477-201ENSMUST00000122617 323 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm24497-201ENSMUST00000177868 191 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm37361-201ENSMUST00000194345 132 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm42623-201ENSMUST00000197225 379 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm24350-202ENSMUST00000198309 132 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 AL627387.1-201ENSMUST00000226063 250 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm24152-201ENSMUST00000082764 163 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm23444-201ENSMUST00000082922 191 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gm25651-201ENSMUST00000083782 119 ntBASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shkbp1Q6P7W2 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm24282-201ENSMUST00000104232 66 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm12071-201ENSMUST00000121968 469 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm25321-201ENSMUST00000122558 102 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm26275-201ENSMUST00000157101 268 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm23466-201ENSMUST00000157133 106 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm25599-201ENSMUST00000157816 103 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm27580-201ENSMUST00000183666 149 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Mir6916-201ENSMUST00000184514 63 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm29602-201ENSMUST00000186887 442 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm43193-201ENSMUST00000197732 441 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm43746-201ENSMUST00000200028 317 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm44519-201ENSMUST00000206486 122 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm30534-201ENSMUST00000217928 207 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm22249-201ENSMUST00000082485 136 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm25812-201ENSMUST00000082751 103 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.27□□□□□ -1.89
Shkbp1Q6P7W2 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm24116-201ENSMUST00000103975 107 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm25115-201ENSMUST00000157187 140 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm25391-201ENSMUST00000157342 134 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Mir669k-201ENSMUST00000177742 127 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm25673-201ENSMUST00000179957 127 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm27285-201ENSMUST00000183875 127 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Mir6914-201ENSMUST00000184999 69 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm44657-201ENSMUST00000208568 450 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Shkbp1Q6P7W2 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Mir466p-201ENSMUST00000103925 89 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm25421-201ENSMUST00000104218 164 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm6829-201ENSMUST00000119858 360 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm14922-201ENSMUST00000121131 163 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Mir1942-201ENSMUST00000157274 63 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm27718-201ENSMUST00000183721 86 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm27308-201ENSMUST00000184807 233 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm18341-201ENSMUST00000197538 622 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm22828-201ENSMUST00000083768 107 ntBASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shkbp1Q6P7W2 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Shkbp1Q6P7W2 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Shkbp1Q6P7W2 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms