Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.61□□□□□ -2.15
Trav8d-2Q5R1B6 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.61□□□□□ -2.15
Trav8d-2Q5R1B6 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.61□□□□□ -2.15
Trav8d-2Q5R1B6 Mir107-201ENSMUST00000083660 87 ntBASIC1.61□□□□□ -2.15
Trav8d-2Q5R1B6 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trav8d-2Q5R1B6 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trav8d-2Q5R1B6 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trav8d-2Q5R1B6 Gm11786-201ENSMUST00000120799 155 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm14766-201ENSMUST00000121689 367 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm23331-201ENSMUST00000157423 108 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm26181-201ENSMUST00000157687 106 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm7925-201ENSMUST00000166690 401 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm25958-201ENSMUST00000175114 71 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm24656-201ENSMUST00000177548 132 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm27544-201ENSMUST00000185069 155 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Mir691-201ENSMUST00000199719 78 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm23462-201ENSMUST00000083264 104 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Mir301-201ENSMUST00000083655 86 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm25859-201ENSMUST00000083710 91 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm22577-201ENSMUST00000083731 109 ntBASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trav8d-2Q5R1B6 Gm11358-201ENSMUST00000122310 373 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm25012-201ENSMUST00000158396 164 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm25069-201ENSMUST00000175238 86 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm8151-201ENSMUST00000184817 871 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm28151-201ENSMUST00000189404 951 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm44142-201ENSMUST00000203358 311 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm24406-201ENSMUST00000083026 128 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm26175-201ENSMUST00000083794 131 ntBASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav8d-2Q5R1B6 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm25507-201ENSMUST00000116981 144 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm23469-201ENSMUST00000157131 104 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm24481-201ENSMUST00000157210 102 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm24901-201ENSMUST00000158125 110 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm25163-201ENSMUST00000158905 104 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm25933-201ENSMUST00000178943 108 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm27385-201ENSMUST00000184747 104 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm29604-201ENSMUST00000187176 163 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm44564-201ENSMUST00000207985 180 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm45375-201ENSMUST00000210338 280 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm25853-201ENSMUST00000082793 132 ntBASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav8d-2Q5R1B6 Gm7164-201ENSMUST00000117503 450 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm13457-201ENSMUST00000117885 267 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm15365-201ENSMUST00000122392 300 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm23523-201ENSMUST00000180190 107 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm29352-201ENSMUST00000188054 544 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm28648-201ENSMUST00000190092 343 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Snord43-201ENSMUST00000199549 108 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm18854-201ENSMUST00000211196 329 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm24412-201ENSMUST00000083426 109 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trav8d-2Q5R1B6 Gm25274-201ENSMUST00000104296 135 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm22494-201ENSMUST00000104495 128 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm16242-201ENSMUST00000117741 334 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm24892-201ENSMUST00000122747 104 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm15281-201ENSMUST00000125181 351 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm8121-201ENSMUST00000153583 499 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm22328-201ENSMUST00000158074 112 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm25994-201ENSMUST00000175392 101 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm26652-202ENSMUST00000181672 475 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm27817-201ENSMUST00000184302 233 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm27624-201ENSMUST00000185047 177 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm29073-201ENSMUST00000185563 664 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm29165-201ENSMUST00000190655 664 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm29211-201ENSMUST00000191470 664 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm37923-201ENSMUST00000191624 161 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Gm37658-201ENSMUST00000192672 315 ntBASIC1.56□□□□□ -2.16
Trav8d-2Q5R1B6 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 202.9 ms