Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col17a1Q07563 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm25094-201ENSMUST00000103992 131 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm25875-201ENSMUST00000104323 107 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm14846-201ENSMUST00000121868 216 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm25599-201ENSMUST00000157816 103 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm2962-201ENSMUST00000159266 336 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm17052-201ENSMUST00000165496 289 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm22192-201ENSMUST00000175128 85 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm21991-201ENSMUST00000180006 508 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm27545-201ENSMUST00000184755 202 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm1833-201ENSMUST00000191608 682 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.19□□□□□ -1.74
Col17a1Q07563 Gm25632-201ENSMUST00000083112 85 ntBASIC4.19□□□□□ -1.74
Col17a1Q07563 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col17a1Q07563 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col17a1Q07563 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col17a1Q07563 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm11490-201ENSMUST00000118128 272 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm6444-201ENSMUST00000119611 458 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm25720-201ENSMUST00000157503 105 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm28020-201ENSMUST00000157739 67 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm26291-201ENSMUST00000158889 137 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Snord93-201ENSMUST00000175580 71 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm27648-201ENSMUST00000184315 107 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm28288-201ENSMUST00000191019 214 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm37807-201ENSMUST00000194310 190 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm6059-201ENSMUST00000196903 340 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm44657-201ENSMUST00000208568 450 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm5899-201ENSMUST00000071770 270 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col17a1Q07563 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col17a1Q07563 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm24629-201ENSMUST00000122762 89 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm24005-201ENSMUST00000158459 296 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm27580-201ENSMUST00000183666 149 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm27700-201ENSMUST00000185003 81 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm29657-201ENSMUST00000189807 342 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Mir691-201ENSMUST00000199719 78 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 AC127371.1-202ENSMUST00000228923 306 ntBASIC4.18□□□□□ -1.74
Col17a1Q07563 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col17a1Q07563 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col17a1Q07563 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm43046-201ENSMUST00000198771 2451 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm12513-201ENSMUST00000118617 352 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm20542-201ENSMUST00000174582 372 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm24811-201ENSMUST00000175313 100 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm37089-201ENSMUST00000195616 129 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm45778-201ENSMUST00000211959 153 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm25078-201ENSMUST00000082530 107 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm23645-201ENSMUST00000083228 108 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col17a1Q07563 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.17□□□□□ -1.74
Col17a1Q07563 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col17a1Q07563 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm13153-201ENSMUST00000120969 637 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm25935-201ENSMUST00000178746 107 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm28849-201ENSMUST00000188127 174 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm29167-201ENSMUST00000190024 377 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm28330-201ENSMUST00000190353 171 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm45815-201ENSMUST00000220241 146 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm24045-201ENSMUST00000083113 98 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Gm15303-201ENSMUST00000118676 2624 ntBASIC4.16□□□□□ -1.74
Col17a1Q07563 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col17a1Q07563 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm23472-201ENSMUST00000101806 191 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm24423-201ENSMUST00000101982 106 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm26077-201ENSMUST00000104064 123 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm25664-201ENSMUST00000157697 107 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm22556-201ENSMUST00000157803 100 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm25486-201ENSMUST00000158726 63 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm24497-201ENSMUST00000177868 191 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm24638-201ENSMUST00000179807 132 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm19123-201ENSMUST00000190716 651 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm43587-201ENSMUST00000199590 204 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm44825-201ENSMUST00000207557 150 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm44598-201ENSMUST00000207566 150 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm23444-201ENSMUST00000082922 191 ntBASIC4.15□□□□□ -1.75
Col17a1Q07563 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col17a1Q07563 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col17a1Q07563 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col17a1Q07563 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col17a1Q07563 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms