Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm43556-201ENSMUST00000196186 681 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm42164-201ENSMUST00000198881 379 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.19□□□□□ -2.22
Nkx3-1P97436 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm23422-201ENSMUST00000102000 107 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm12304-201ENSMUST00000120312 385 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm14530-201ENSMUST00000122391 333 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm25325-201ENSMUST00000122559 86 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm25052-201ENSMUST00000122661 158 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm23212-201ENSMUST00000122718 60 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm25625-201ENSMUST00000157221 96 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm24418-201ENSMUST00000177597 79 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm24639-201ENSMUST00000178518 79 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm23076-201ENSMUST00000179082 79 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm25077-201ENSMUST00000179157 79 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Mir7059-201ENSMUST00000184825 59 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm43723-201ENSMUST00000196886 189 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm18971-201ENSMUST00000197240 374 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm44024-201ENSMUST00000203008 476 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm44182-201ENSMUST00000204052 115 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.19□□□□□ -2.22
Nkx3-1P97436 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Nkx3-1P97436 Gm25876-201ENSMUST00000104329 119 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm25102-201ENSMUST00000122479 112 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm24262-201ENSMUST00000157431 144 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm24154-201ENSMUST00000175261 130 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm24573-201ENSMUST00000175499 112 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm23862-201ENSMUST00000180342 94 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm43529-201ENSMUST00000199178 412 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.18□□□□□ -2.22
Nkx3-1P97436 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Nkx3-1P97436 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.18□□□□□ -2.22
Nkx3-1P97436 Gm26384-201ENSMUST00000102183 110 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm22149-201ENSMUST00000104442 136 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm14674-201ENSMUST00000117816 342 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm12053-201ENSMUST00000119022 252 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm7916-201ENSMUST00000120325 456 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm23172-201ENSMUST00000157160 124 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm26102-201ENSMUST00000157251 284 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm23829-201ENSMUST00000157392 270 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm23752-201ENSMUST00000157584 115 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Snord13-201ENSMUST00000157627 104 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm25454-201ENSMUST00000157947 315 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm17113-201ENSMUST00000170118 171 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm24084-201ENSMUST00000175173 137 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm25994-201ENSMUST00000175392 101 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm29231-201ENSMUST00000179850 319 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm26652-202ENSMUST00000181672 475 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm27755-201ENSMUST00000184623 132 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm29134-201ENSMUST00000186579 126 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm28337-201ENSMUST00000190425 666 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm31123-201ENSMUST00000192094 666 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Gm44142-201ENSMUST00000203358 311 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.17□□□□□ -2.22
Nkx3-1P97436 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.17□□□□□ -2.22
Nkx3-1P97436 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.17□□□□□ -2.22
Nkx3-1P97436 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm8858-201ENSMUST00000118259 342 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm12432-201ENSMUST00000119540 186 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm14551-201ENSMUST00000120802 256 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm13153-201ENSMUST00000120969 637 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm24892-201ENSMUST00000122747 104 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm22559-201ENSMUST00000157329 134 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm23329-201ENSMUST00000157415 108 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm26393-201ENSMUST00000157625 129 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm23381-201ENSMUST00000157676 94 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm23083-201ENSMUST00000157851 116 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm25012-201ENSMUST00000158396 164 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm25711-201ENSMUST00000158633 128 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm26157-201ENSMUST00000158974 126 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm22166-201ENSMUST00000178419 121 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm22862-201ENSMUST00000178593 121 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm23288-201ENSMUST00000179213 121 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms