Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 AC012175.1-201ENST00000603755 531 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.08□□□□□ -1.44
PTPN6P29350 TET1P1-201ENST00000426627 2301 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
PTPN6P29350 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN6P29350 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPN6P29350 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC009779.8-201ENST00000641684 4384 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPN6P29350 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPN6P29350 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPN6P29350 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.07□□□□□ -1.44
PTPN6P29350 AL033519.1-201ENST00000407266 307 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 UBTFL2-201ENST00000411859 1191 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 FAM183DP-201ENST00000421987 399 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
PTPN6P29350 NPM1P23-201ENST00000440193 849 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 RPL12P49-201ENST00000441100 121 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AC092967.1-201ENST00000449016 481 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 CCNJP1-201ENST00000450600 1149 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN6P29350 RPS27AP3-201ENST00000453803 454 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AC002075.1-201ENST00000457396 676 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 RPL19P11-201ENST00000495944 589 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.07□□□□□ -1.44
PTPN6P29350 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN6P29350 IGKV1D-22-201ENST00000518953 324 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN6P29350 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.07□□□□□ -1.44
PTPN6P29350 RN7SL208P-201ENST00000577964 296 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 MIR3189-201ENST00000578735 73 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN6P29350 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.07□□□□□ -1.44
PTPN6P29350 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AC068213.1-201ENST00000625124 226 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 AP000547.3-204ENST00000588548 2523 ntBASIC6.07□□□□□ -1.44
PTPN6P29350 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PTPN6P29350 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN6P29350 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
PTPN6P29350 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN6P29350 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPN6P29350 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN6P29350 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
PTPN6P29350 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 AC092692.1-201ENST00000623625 2595 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PTPN6P29350 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN6P29350 OR7A2P-201ENST00000304105 930 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTPN6P29350 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 OR11H13P-201ENST00000359695 979 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 RN7SKP237-201ENST00000364663 301 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 SNORA70.9-201ENST00000384370 135 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 AL360271.1-201ENST00000395679 510 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 MED28P4-201ENST00000433137 572 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 GAPDHP37-201ENST00000442317 968 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN6P29350 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN6P29350 AC015524.1-201ENST00000491585 472 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 AC131392.1-201ENST00000506490 633 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms