Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TNFSF4P23510 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 SNORA70.5-201ENST00000365519 135 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 RNU6-354P-201ENST00000383862 107 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 RNU6-610P-201ENST00000384264 107 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC006511.2-201ENST00000388966 660 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 HMGB3P7-201ENST00000400214 611 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL136131.1-201ENST00000406079 803 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL034374.1-201ENST00000406329 351 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 AL445213.1-201ENST00000412589 747 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL662791.3-201ENST00000413771 776 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC244452.1-201ENST00000413798 141 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 RPL36P18-201ENST00000419316 318 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL359633.1-201ENST00000421403 310 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 GAPDHP69-201ENST00000425504 1008 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.04□□□□□ -1.44
TNFSF4P23510 AL035458.1-201ENST00000433096 585 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 AL354983.1-201ENST00000434580 906 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 AC002486.2-201ENST00000447806 590 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFSF4P23510 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.04□□□□□ -1.44
TNFSF4P23510 MTATP6P14-201ENST00000455189 673 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 RPLP0P1-201ENST00000457002 361 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 SNORA81.1-201ENST00000458922 177 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 CBX1P5-201ENST00000475330 559 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.04□□□□□ -1.44
TNFSF4P23510 TPT1P8-201ENST00000510120 555 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 SNORA31.13-201ENST00000516624 135 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 HIGD1AP18-201ENST00000520730 278 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 AP001803.1-201ENST00000525668 147 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFSF4P23510 SETP17-201ENST00000534163 817 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.04□□□□□ -1.44
TNFSF4P23510 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 AC126323.4-201ENST00000566935 234 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFSF4P23510 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 AC092960.1-201ENST00000604762 351 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC079610.2-201ENST00000604818 690 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC017076.1-201ENST00000607613 578 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC023510.2-201ENST00000622162 746 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.04□□□□□ -1.44
TNFSF4P23510 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFSF4P23510 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFSF4P23510 AL356118.1-201ENST00000635272 1078 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL356585.10-201ENST00000641883 123 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AL596275.2-203ENST00000641951 371 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.04□□□□□ -1.44
TNFSF4P23510 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.04□□□□□ -1.44
TNFSF4P23510 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 MROH3P-201ENST00000435735 2676 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 AC083806.2-201ENST00000617795 2685 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 HSPD1P11-201ENST00000508643 1702 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
TNFSF4P23510 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
TNFSF4P23510 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFSF4P23510 FO082842.1-201ENST00000423552 1370 ntBASIC6.04□□□□□ -1.44
TNFSF4P23510 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
TNFSF4P23510 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFSF4P23510 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 AL033543.1-201ENST00000623440 13454 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TNFSF4P23510 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TNFSF4P23510 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms