Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SCARNA5-201ENST00000516201 276 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 OR4C49P-201ENST00000563891 900 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 PPIAP14-201ENST00000577627 496 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC073488.9-201ENST00000631601 754 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL591135.1-201ENST00000401578 5914 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC093297.3-201ENST00000607056 2517 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 RNA5SP308-201ENST00000362532 115 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 U3.52-201ENST00000384034 216 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 RPL5P20-201ENST00000403848 896 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 MRPS21P5-201ENST00000417885 231 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 CCNJP1-201ENST00000450600 1149 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 RPL31P11-202ENST00000454082 372 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 RN7SL790P-201ENST00000474043 298 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC128716.1-201ENST00000475129 166 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 RPL5P14-201ENST00000494197 878 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC131392.1-201ENST00000506490 633 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC106800.3-201ENST00000511389 308 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC131935.1-201ENST00000524621 333 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 CASP1P2-201ENST00000526830 1258 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 CCDC58P1-201ENST00000578567 430 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 RPL29P33-201ENST00000587474 316 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AL021368.3-201ENST00000607119 578 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 MIR6849-201ENST00000618543 69 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC116667.2-201ENST00000641075 823 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 AC092692.1-201ENST00000623625 2595 ntBASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTN4IP1Q8WWV3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AL359976.1-201ENST00000418655 3528 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 GNG5P2-201ENST00000372054 207 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MRPS6P2-201ENST00000381143 370 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 SNORA7A-201ENST00000384765 139 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 RPL12P23-201ENST00000405880 490 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MIR1266-201ENST00000408125 84 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 RNA5SP155-201ENST00000411154 129 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC006509.1-201ENST00000420788 634 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms