Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm16162-201ENSMUST00000162296 297 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm20477-201ENSMUST00000174028 280 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm20613-201ENSMUST00000175828 345 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm24418-201ENSMUST00000177597 79 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm23725-201ENSMUST00000177876 107 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm24639-201ENSMUST00000178518 79 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm23076-201ENSMUST00000179082 79 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm25077-201ENSMUST00000179157 79 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm43914-201ENSMUST00000203592 594 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Ear14-201ENSMUST00000049559 468 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm23453-201ENSMUST00000083326 106 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm22577-201ENSMUST00000083731 109 ntBASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
Trav3-3Q5R1C3 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm24122-201ENSMUST00000104107 132 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm24079-201ENSMUST00000104352 132 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm24598-201ENSMUST00000122510 74 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm25333-201ENSMUST00000158035 246 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm25035-201ENSMUST00000175414 77 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm37869-201ENSMUST00000193385 595 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Snord38a-201ENSMUST00000083746 71 ntBASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav3-3Q5R1C3 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm15010-201ENSMUST00000117153 407 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm13672-201ENSMUST00000117554 459 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm15986-201ENSMUST00000122153 400 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm25269-201ENSMUST00000122601 104 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm22631-201ENSMUST00000179656 94 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm28926-201ENSMUST00000191063 680 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Mir497-201ENSMUST00000200557 84 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm45013-201ENSMUST00000206883 178 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Gm23093-201ENSMUST00000083450 102 ntBASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trav3-3Q5R1C3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm13432-201ENSMUST00000118861 241 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm12956-201ENSMUST00000122184 414 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm24896-201ENSMUST00000122741 135 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm16328-201ENSMUST00000126985 196 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm22082-201ENSMUST00000157587 161 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm24084-201ENSMUST00000175173 137 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm27248-201ENSMUST00000184004 166 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm37599-201ENSMUST00000193067 489 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm44477-201ENSMUST00000199661 110 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Mir691-201ENSMUST00000199719 78 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm44142-201ENSMUST00000203358 311 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm45366-201ENSMUST00000209828 384 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm40810-201ENSMUST00000219149 253 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm25589-201ENSMUST00000082502 166 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm23100-201ENSMUST00000083455 141 ntBASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Trav3-3Q5R1C3 Gm12941-201ENSMUST00000117934 220 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm23043-201ENSMUST00000157890 109 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm23858-201ENSMUST00000158384 106 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm27660-201ENSMUST00000184028 208 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm27399-201ENSMUST00000184250 78 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm28740-201ENSMUST00000186142 215 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm37550-201ENSMUST00000193230 463 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm42570-201ENSMUST00000195937 292 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm35558-203ENSMUST00000222264 204 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav3-3Q5R1C3 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.28□□□□□ -2.2
Trav3-3Q5R1C3 Gm6025-201ENSMUST00000121517 201 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms