Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Snord14c-201ENSMUST00000101927 86 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm24867-201ENSMUST00000104161 107 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm25875-201ENSMUST00000104323 107 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm16171-201ENSMUST00000118004 324 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm25425-201ENSMUST00000157611 96 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm24001-201ENSMUST00000158463 85 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm23474-201ENSMUST00000158884 75 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm25235-201ENSMUST00000179933 107 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm44938-201ENSMUST00000208614 427 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.87□□□□□ -1.95
Col28a1Q2UY11 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm23041-201ENSMUST00000083868 106 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.87□□□□□ -1.95
Col28a1Q2UY11 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm11253-201ENSMUST00000118486 201 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm12793-201ENSMUST00000119268 292 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm12723-201ENSMUST00000120700 451 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm11471-201ENSMUST00000121824 198 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm24481-201ENSMUST00000157210 102 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm26214-201ENSMUST00000158581 107 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm27585-201ENSMUST00000183717 199 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm27893-201ENSMUST00000184408 194 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm27477-201ENSMUST00000184649 143 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm27700-201ENSMUST00000185003 81 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm9402-201ENSMUST00000196849 388 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm43583-201ENSMUST00000199235 303 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm44223-201ENSMUST00000204854 114 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm44964-201ENSMUST00000207011 273 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm5899-201ENSMUST00000071770 270 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm23625-201ENSMUST00000082457 100 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col28a1Q2UY11 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm13504-201ENSMUST00000117490 316 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm15002-201ENSMUST00000118406 452 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm12417-201ENSMUST00000119153 403 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm15029-201ENSMUST00000119742 199 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm22098-201ENSMUST00000157930 85 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm17187-201ENSMUST00000164622 410 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm18520-201ENSMUST00000174783 658 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm25470-201ENSMUST00000175576 111 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Mir5123-201ENSMUST00000177794 83 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm25450-201ENSMUST00000179144 107 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm29429-201ENSMUST00000187071 121 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm43529-201ENSMUST00000199178 412 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm44960-201ENSMUST00000207403 141 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm45380-201ENSMUST00000210465 315 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm19790-201ENSMUST00000214414 251 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm22979-201ENSMUST00000082609 159 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm24611-201ENSMUST00000083272 107 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm22744-201ENSMUST00000083444 65 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.85□□□□□ -1.95
Col28a1Q2UY11 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Col28a1Q2UY11 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Mir541-201ENSMUST00000102097 90 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm23232-201ENSMUST00000157300 105 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm25390-201ENSMUST00000157341 103 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm22145-201ENSMUST00000157396 148 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm26186-201ENSMUST00000157689 125 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm22516-201ENSMUST00000158266 124 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm3370-201ENSMUST00000171785 500 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Mir6335-201ENSMUST00000184081 98 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm27421-201ENSMUST00000184729 167 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm27545-201ENSMUST00000184755 202 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm37089-201ENSMUST00000195616 129 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm45273-201ENSMUST00000211559 281 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms