Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 OR7E91P-202ENST00000642062 1198 ntBASIC5.32□□□□□ -1.56
CD74P04233 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 SAMM50P1-201ENST00000455403 1399 ntBASIC5.31□□□□□ -1.56
CD74P04233 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 AP001541.1-201ENST00000623322 1904 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC023886.2-201ENST00000321285 411 ntBASIC5.31□□□□□ -1.56
CD74P04233 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 AC009506.2-201ENST00000420635 840 ntBASIC5.31□□□□□ -1.56
CD74P04233 AL139184.1-202ENST00000422303 222 ntBASIC5.31□□□□□ -1.56
CD74P04233 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 IGLV3-4-201ENST00000432300 244 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC114402.2-201ENST00000432760 643 ntBASIC5.31□□□□□ -1.56
CD74P04233 ATP5LP4-201ENST00000434169 307 ntBASIC5.31□□□□□ -1.56
CD74P04233 AL731534.1-201ENST00000434711 269 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.31□□□□□ -1.56
CD74P04233 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 OSTCP1-201ENST00000455507 450 ntBASIC5.31□□□□□ -1.56
CD74P04233 VPS25P1-201ENST00000455691 508 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC112187.1-201ENST00000455837 479 ntBASIC5.31□□□□□ -1.56
CD74P04233 Z83838.1-202ENST00000456225 839 ntBASIC5.31□□□□□ -1.56
CD74P04233 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 RPL19P11-201ENST00000495944 589 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 AC097486.1-201ENST00000515331 210 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 AP001646.2-201ENST00000528645 1156 ntBASIC5.31□□□□□ -1.56
CD74P04233 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 AL049779.3-201ENST00000557141 606 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 AC090241.1-201ENST00000587732 621 ntBASIC5.31□□□□□ -1.56
CD74P04233 EXOSC3P2-201ENST00000594464 497 ntBASIC5.31□□□□□ -1.56
CD74P04233 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 AL161931.1-201ENST00000612768 246 ntBASIC5.31□□□□□ -1.56
CD74P04233 RNA5SP439-201ENST00000617595 124 ntBASIC5.31□□□□□ -1.56
CD74P04233 pRNA.9-201ENST00000618609 89 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC241377.1-201ENST00000619797 406 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.31□□□□□ -1.56
CD74P04233 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 AL442128.2-201ENST00000620246 1824 ntBASIC5.31□□□□□ -1.56
CD74P04233 AC099654.3-201ENST00000447087 1546 ntBASIC5.31□□□□□ -1.56
CD74P04233 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CD74P04233 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.31□□□□□ -1.56
CD74P04233 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD74P04233 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 AC012078.1-201ENST00000405035 1646 ntBASIC5.3□□□□□ -1.56
CD74P04233 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 OR4G1P-202ENST00000641173 1788 ntBASIC5.3□□□□□ -1.56
CD74P04233 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 RNA5SP355-201ENST00000365317 135 ntBASIC5.3□□□□□ -1.56
CD74P04233 RN7SKP186-201ENST00000365371 303 ntBASIC5.3□□□□□ -1.56
CD74P04233 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD74P04233 AL590635.1-201ENST00000406314 586 ntBASIC5.3□□□□□ -1.56
CD74P04233 RN7SKP117-201ENST00000410175 264 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms