Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 PPIAP24-201ENST00000328558 471 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 RNA5SP152-201ENST00000365184 110 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 U3.52-201ENST00000384034 216 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 NHP2P2-201ENST00000396362 460 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 AL451061.1-201ENST00000407887 862 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 SETP22-201ENST00000412243 957 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 AL139184.1-202ENST00000422303 222 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 RPS21P1-201ENST00000434479 247 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 RPL22P11-201ENST00000434894 385 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 AC073410.1-201ENST00000435125 589 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.02□□□□□ -1.61
SSSCA1O60232 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.02□□□□□ -1.61
SSSCA1O60232 OSTCP1-201ENST00000455507 450 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 AC025271.1-201ENST00000485045 429 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.02□□□□□ -1.61
SSSCA1O60232 RN7SL714P-201ENST00000487050 298 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 TRBV5-2-201ENST00000489095 273 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC010343.2-201ENST00000510162 224 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.02□□□□□ -1.61
SSSCA1O60232 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.02□□□□□ -1.61
SSSCA1O60232 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 AL589863.1-201ENST00000595383 631 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.02□□□□□ -1.61
SSSCA1O60232 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.02□□□□□ -1.61
SSSCA1O60232 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SSSCA1O60232 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.01□□□□□ -1.61
SSSCA1O60232 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SSSCA1O60232 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AC126474.2-201ENST00000623268 1750 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 AL022311.1-201ENST00000623726 19416 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 ZNF969P-201ENST00000510345 2341 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 AL359091.1-201ENST00000449048 1734 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 SNORD35A-201ENST00000363389 86 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AL596268.1-201ENST00000427910 1048 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 MED28P4-201ENST00000433137 572 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 KRT8P51-201ENST00000438938 274 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 RN7SL352P-201ENST00000466002 277 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
SSSCA1O60232 RN7SL868P-201ENST00000485915 303 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AC136777.2-201ENST00000522979 358 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AC092865.1-201ENST00000544395 1023 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AC009729.1-201ENST00000548873 1133 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.01□□□□□ -1.61
SSSCA1O60232 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 MIR7848-201ENST00000617402 101 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 AC027559.1-201ENST00000636288 271 ntBASIC5.01□□□□□ -1.61
SSSCA1O60232 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SSSCA1O60232 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.01□□□□□ -1.61
SSSCA1O60232 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SSSCA1O60232 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSSCA1O60232 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.01□□□□□ -1.61
SSSCA1O60232 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms