Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5538W4VSP6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5538W4VSP6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5538W4VSP6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5538W4VSP6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5538W4VSP6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5538W4VSP6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gm5538W4VSP6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Gm11539-201ENSMUST00000119837 557 ntBASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Gm13436-201ENSMUST00000120418 567 ntBASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Gm30025-201ENSMUST00000218555 728 ntBASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5538W4VSP6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5538W4VSP6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Gm15565-201ENSMUST00000118890 427 ntBASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5538W4VSP6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms