Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PdfS4R2K0 Gm13534-201ENSMUST00000121169 513 ntBASIC13.11□□□□□ -0.31
PdfS4R2K0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.11□□□□□ -0.31
PdfS4R2K0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PdfS4R2K0 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.11□□□□□ -0.31
PdfS4R2K0 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.11□□□□□ -0.31
PdfS4R2K0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PdfS4R2K0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PdfS4R2K0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PdfS4R2K0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PdfS4R2K0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
PdfS4R2K0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.1□□□□□ -0.31
PdfS4R2K0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
PdfS4R2K0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PdfS4R2K0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.09□□□□□ -0.31
PdfS4R2K0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PdfS4R2K0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
PdfS4R2K0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.09□□□□□ -0.31
PdfS4R2K0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
PdfS4R2K0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.09□□□□□ -0.31
PdfS4R2K0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PdfS4R2K0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PdfS4R2K0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PdfS4R2K0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
PdfS4R2K0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
PdfS4R2K0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PdfS4R2K0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.08□□□□□ -0.31
PdfS4R2K0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PdfS4R2K0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PdfS4R2K0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PdfS4R2K0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PdfS4R2K0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Mir5133-201ENSMUST00000174955 77 ntBASIC13.08□□□□□ -0.32
PdfS4R2K0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.08□□□□□ -0.32
PdfS4R2K0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms