Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Timm23-208ENSMUST00000226683 750 ntBASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Gm715-201ENSMUST00000117865 831 ntBASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.05■□□□□ 0.32
H2afb2S4R1M3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb2S4R1M3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb2S4R1M3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb2S4R1M3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb2S4R1M3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb2S4R1M3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
H2afb2S4R1M3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms