Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CcsQ9WU84 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.26□□□□□ -0.29
CcsQ9WU84 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CcsQ9WU84 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CcsQ9WU84 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.26□□□□□ -0.29
CcsQ9WU84 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Mir5133-201ENSMUST00000174955 77 ntBASIC13.26□□□□□ -0.29
CcsQ9WU84 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CcsQ9WU84 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CcsQ9WU84 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.25□□□□□ -0.29
CcsQ9WU84 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CcsQ9WU84 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CcsQ9WU84 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CcsQ9WU84 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.24□□□□□ -0.29
CcsQ9WU84 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CcsQ9WU84 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
CcsQ9WU84 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CcsQ9WU84 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.24□□□□□ -0.29
CcsQ9WU84 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.24□□□□□ -0.29
CcsQ9WU84 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CcsQ9WU84 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CcsQ9WU84 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CcsQ9WU84 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
CcsQ9WU84 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CcsQ9WU84 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.23□□□□□ -0.29
CcsQ9WU84 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CcsQ9WU84 Gm6420-201ENSMUST00000193885 723 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms