Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col13a1Q9R1N9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Birc2-201ENSMUST00000054878 378 ntBASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col13a1Q9R1N9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col13a1Q9R1N9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col13a1Q9R1N9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col13a1Q9R1N9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col13a1Q9R1N9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col13a1Q9R1N9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col13a1Q9R1N9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col13a1Q9R1N9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms