Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd2Q9R1A8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.6■□□□□ 0.41
Rfwd2Q9R1A8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd2Q9R1A8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Dancr-204ENSMUST00000132389 2347 ntBASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd2Q9R1A8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfwd2Q9R1A8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Rfwd2Q9R1A8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rfwd2Q9R1A8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfwd2Q9R1A8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rfwd2Q9R1A8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Gm38285-201ENSMUST00000192928 922 ntBASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd2Q9R1A8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Zfp783-201ENSMUST00000095946 670 ntBASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd2Q9R1A8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.56■□□□□ 0.4
Rfwd2Q9R1A8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd2Q9R1A8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms